Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_1236 |
Symbol | |
ID | 4309409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 1350437 |
End bp | 1351162 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638149045 |
Product | two component transcriptional regulator |
Protein accession | YP_773128 |
Protein GI | 115351289 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.178062 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACGACA ATCCGCTCAA ATACCGTGTG CTGCTGATCG AGGACGACGA CCGCCTCGCG CAGCTCGTGC GCGAATACCT CGACAACTAT GAATTCACGG TGACGGTCGT GCGGCGCGGC GACCTGGCCG TCGCGGCGGT GCGCGAGCAC GAGCCCGCGC TCGTGATACT CGACCTGATG CTGCCGAATC TCGACGGGAT GGAAGTGTGC CGGCGCATTC GCGCATTCAC CAACGTCCCG GTGCTGATTC TCACCGCGCG CGCGGACGTC TACGACCAGG TCGCGGGCCT CGAAACCGGC GCCGACGACT ACGTGACGAA GCCGATCGAG CCGCGCGTGC TGGTCGCGCG CGCCCGCGCG CTGCTGCGCC GGGCACGGCC GGCCGCGACG GAAACCCGCG CCGCCGCGCC CGACGCGCTG ATCTTCGGCG AACTGACGAT CTCGCCGCCG AACCGCACGG TCACGTGGCG CGGCGAACCG GTCGACCTGA AGACGGCCGA ATTCAACCTG CTGCTGATCC TCGCGCGCGC GGCCGGCACC GTGCTGAGCC GCGACGACAT CCTGAAGCAG TTGCGCGGGA TCGAGTTCGA CGGGCTCGAC CGCTCGGTCG ACTCCGGCAT CTCGAAGCTG CGGCGCCGTT TCGAGGATGC GTCGTCGGAG CCGCACAAGA TCAAGACGAT CTGGGGCCGC GGCTACCTGT TCAGCCCTTC CGCGTGGGAC GAATAA
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Protein sequence | MYDNPLKYRV LLIEDDDRLA QLVREYLDNY EFTVTVVRRG DLAVAAVREH EPALVILDLM LPNLDGMEVC RRIRAFTNVP VLILTARADV YDQVAGLETG ADDYVTKPIE PRVLVARARA LLRRARPAAT ETRAAAPDAL IFGELTISPP NRTVTWRGEP VDLKTAEFNL LLILARAAGT VLSRDDILKQ LRGIEFDGLD RSVDSGISKL RRRFEDASSE PHKIKTIWGR GYLFSPSAWD E
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