Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_1235 |
Symbol | |
ID | 4309408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 1349066 |
End bp | 1350436 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638149044 |
Product | periplasmic sensor signal transduction histidine kinase |
Protein accession | YP_773127 |
Protein GI | 115351288 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.403806 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGCGTC CGTTGATCAG GCTGTACCTC ATCGTGATCC TGTGCGGCGC CGGATCGATC GCGTTCATCC AGTTCTCGTT CGACCGGATC TTCTACGAAC GCGCGGCGCA GGCGCAGCGA GACTCGCTGA CCACCTACGC GTTCGTGCTG AACGATTATC TCGAACGCCA TCCGGGCGCG CAGCGCACGC TCGCGCTGCG CGAGCTCGCG AAGCACGGCA AGGAAGGATT CGACTTCGTG ACGATGGCTG AAGCCCGCGC GCAACTGAGC GGCGCGCCAC TGCGCGACCT CGACGCCGGC AAGATCGCGA TCGGCTATGA CGGCAAGGAT TACTACATGC CGCTCGCGGA CGGTTCCGTG CTGCATGCGC GCCCGATCCA GCCCTTCGAC CTCGACATCA AGATCTACGC CTACTTGCTG CTCGCGCTTG CCGCGCTGTT CGCGGTCGTG CTGTGGATCT CGTATCACTG GCGCGACCTG CGCAGGCTGC AGGCCGCCGC CCATGCGTTC GGCGCGGGCC GCCTGTCGAC CCGCGTGAAG CTGTCCGGCC GGTCGAACAT CTACGAGCTG TCGCAGCAGT TCAACGACAT GGCCGAACGG ATCGAGGCGT CGATCAAGCA GCAGCGCGAG ATGATGCACG GGATCTCGCA TGAGCTGAAG ACGCCGCTCG CCCGCCTCGA ATTCGGGCTC GCGCTGCTCG CCGAATCCGA CGAGAGCGGC CGGATGCGCG AACGCCGCGA CGAACTGCGG CGCGACGTGC GCGAACTCGA CGAACTGGTG ACCGAGCTGC TGACGATCGG GCGGCTCGAA CAAGGCGCCA GCGAGCTCGC GCCGATGGAC GTCGTCGTCG ATGCGCTGAT CGACAGCGTC GCCGGCAACG TCGCGAACGA CCTCGCCGAT CGCGGCATCA CGCTCGACGT GTCGACGACC GGCGCACCCG CCACCCACGT GTGCGATCCG AAACTCGTCG CTCGCGCGCT GCTCAACCTG ATCCGCAACA GCGCGCGCTA TGCGGCGCGC ACGGTGCTGC TGTCCGCGAC GCACGATGCG TCAGGGGCGC TGGTGCTGAG CGTCGACGAC GACGGCCCCG GCATTCCGGC CGCCGAGCGC GCGCGCGTGT TCGAACCGTT CCAGCGGCTC GATTCGAGCC GCGACCGGCA GACGGGCGGG TTCGGTCTCG GGCTCGCGAT CGTGCGGCGC GTTGCGCTCG TGCACGGCGG CAACGTGCGG CTCGAGGATT CGCCGCTCGG CGGCGCACGC TTCGTGATTT CGCTGCCGGC GCGGACCTTG CCGGACTTCC GCGGCAACGC GCAGGCGAGT CCGGCATGCG GCCGGGCCGA TCTCGCCGGC GCGGCTTCAT TGCTCAGCTG A
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Protein sequence | MLRPLIRLYL IVILCGAGSI AFIQFSFDRI FYERAAQAQR DSLTTYAFVL NDYLERHPGA QRTLALRELA KHGKEGFDFV TMAEARAQLS GAPLRDLDAG KIAIGYDGKD YYMPLADGSV LHARPIQPFD LDIKIYAYLL LALAALFAVV LWISYHWRDL RRLQAAAHAF GAGRLSTRVK LSGRSNIYEL SQQFNDMAER IEASIKQQRE MMHGISHELK TPLARLEFGL ALLAESDESG RMRERRDELR RDVRELDELV TELLTIGRLE QGASELAPMD VVVDALIDSV AGNVANDLAD RGITLDVSTT GAPATHVCDP KLVARALLNL IRNSARYAAR TVLLSATHDA SGALVLSVDD DGPGIPAAER ARVFEPFQRL DSSRDRQTGG FGLGLAIVRR VALVHGGNVR LEDSPLGGAR FVISLPARTL PDFRGNAQAS PACGRADLAG AASLLS
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