Gene Bamb_1234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1234 
Symbol 
ID4309407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp1347911 
End bp1348891 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content72% 
IMG OID638149043 
Productalcohol dehydrogenase 
Protein accessionYP_773126 
Protein GI115351287 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCCC TGATGTGTAC CGCATTCGGC CCGATCGACC GCTTGCGTAT CGACGACGTC 
GCGATTCCCG AACCGGCCGC GGGCCAGGTG CGGATTCGCG TGAAGGCGGC GTCGCTCAAC
TTCCCCGATG CGCTGATCGT CCAGGGGTTG TATCAGGTGA AGCCGGCGCT GCCGTTCTCG
CCCGGTGCGG AATTCGCCGG CGTGATCGAC GCGGTCGGCG ACGGCGTGAG CGCGTGGCAG
CCGGGCGACG AGGTGGTCGC GTTCACCGGT CACGGCGGCT TCGCCGAGCA GTGTGTGGCC
GACGTGCACC AGATCGCGGC GCTGCCGCCG GGGATGACGT TCGAGCAGGG CGCGGCGCTG
GTGCTGGCCT ACGGCACGTC GCTGCATGCG CTGCAGCAGC GCGCGCGTCT GCAGCAGGGC
GAGACGCTGC TGGTGCTGGG GGCGGCGGGC GGCGTCGGGC TGGCGGCGAT CGAGATCGCG
AAGGCGCTGG GCGCGCGCGT GATCGCGGCC GCGTCGAGCG CGGACAAGCT CGCGCTGTGC
CGCGCAGCGG GCGCCGACGA CACGATCGAC TATGCGACCG AGGACCTGCG GCGCCGCGTC
GATGAACTGA CGGGCGGGCG CGGCGCGGAC GTCGTCTACG ATCCGGTCGG CGGCGCGTAC
AGCGAGGCGG CGCTGCGCGC GACCGCGTGG CGCGGCCGGT TCCTCGTGGT CGGTTTCGCG
GCCGGCGAGA TTCCGAAGAT CGCGCTGAAC CTGGCGCTGC TGAAGGAGCG CGATATTCTC
GGCGTGTTCT GGGGCGACGC GGTGCGGCGC GATCCCGCGG AGCACGCGGT GAACATGCGC
CAGCTGGCGC AATGGTTCGC GGCCGGCAAG GTGCGGCCGG CGATCACCGA GCGCGTGCCG
CTGTCGGGTG CGGCCGACGC GATCGCGCGC ATGGCGAACC GGCAGGTCAA GGGCAAGGTC
GTGATTCTGC CGGACGCGTG A
 
Protein sequence
MKALMCTAFG PIDRLRIDDV AIPEPAAGQV RIRVKAASLN FPDALIVQGL YQVKPALPFS 
PGAEFAGVID AVGDGVSAWQ PGDEVVAFTG HGGFAEQCVA DVHQIAALPP GMTFEQGAAL
VLAYGTSLHA LQQRARLQQG ETLLVLGAAG GVGLAAIEIA KALGARVIAA ASSADKLALC
RAAGADDTID YATEDLRRRV DELTGGRGAD VVYDPVGGAY SEAALRATAW RGRFLVVGFA
AGEIPKIALN LALLKERDIL GVFWGDAVRR DPAEHAVNMR QLAQWFAAGK VRPAITERVP
LSGAADAIAR MANRQVKGKV VILPDA