| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1232 |
|---|
| Symbol | |
|---|
| ID | 4309405 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 1343186 |
|---|
| End bp | 1345510 |
|---|
| Gene Length | 2325 bp |
|---|
| Protein Length | 774 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638149041 |
|---|
| Product | aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding |
|---|
| Protein accession | YP_773124 |
|---|
| Protein GI | 115351285 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCGC CGGAACTCTC CGTCCACAAC GAAAGCCGCC GCGCATTGCT GCTCGGCTTC
GCATCCGGCG GACTGCTGCT CGCGTTCGGC GTGCCGTCGC TTGCGCGCGC GGCCGCGCCC
GTGCAGCCGC CGGTCAGCCC GAATCCGCAG TACGGCGGCG CGGGCATGCC GCACGGCTTG
CGTGACGATC CGCACCTGTT CGTCGCGATC GCGCCCGACG GCACGGTGAC GGTGACCTGC
ATTCGCTCGG AGATGGGACA AGGGGTGCGC ACGAGCGTCG CGCTCGTGGT CGCCGACGAG
CTGGGCGCGG ACTGGGCACG CGTGAAGGTC GCGCAGGCCG TCGGCGACGA GCCGCGCTAC
GGCAACCAGA ACACCGATGG TTCGCGCAGC CTGCGCCAGA GTTTCGCGGC GCTGCGCCGC
GCGGGGGCGG CCGCGCGCAC GATGCTCGAG CAGGCCGCGG CGGCGACCTG GGGCGTCGAC
GTGCGTCAAG TGAAGGCGAC GGTGCACGAG GTCGTCGATA CGAAAACCGG GCGCAAGCTC
GGCTTCGGTG AACTGGCCGC GAAGGCGGCC GCGCTGCCCG TACCCGATAC GAAGAGCGTG
GCATTGAAGG CGCCGGCCGA GTTCCGCTAT ATCGGCAAGG GGGAAACGGC ATTGATCGAC
GGCCGCGACA TCGTCGGCGG CCGCGCGCAC TACGGGATCG ACACGCGGCT CGACGGCATG
CTGTACGCGG TCGTCGCGCG TCCGCCGGCC TATGGCGATA CGGTCGCGTC GTTCGACGCG
TCCGCCGCGG AAAAGCTGCC GGGTGTCGTC AAGGTCGTGC AGCTCGCGTC TGCGCCGCTG
CCGTCCGGGT TCCAGCCGCT CGGCGGCGTG GCCGTGATCG CACGCGACAC GTGGACAGCC
ATCCAGGCAC GCGCCCGACT GAAGATCGAC TGGAAGCGCG GGCCGCACGC AGGCTACGAT
TCGGCGGCCT ACCGCAAGAC GCTCGAAGCG GCGGCCGCGC AACCGGGCGA CGTGATCCGC
GATGATGGCG ATACGGCCGC GGCGCTCGCG GGCGCCGCGA AGCGGGTGCG TGCGACGTAC
TACATTCCGC ATCTCGCGCA CGCGACGATG GAGCCGCCCG CGGCCGTCGC GCGCGTGGCC
GACGGCCGCT GCGAAGTCTG GACCTGCACG CAGGCGCCGC AGACCACGCG CGACGAAATC
GCGAAGGCGC TCGCGCTGCC GAGCGAGCGC GTCACGGTCA ACGTGACGCT GCTCGGCGGC
GGCTTCGGCC GCAAGTCGAA ACCGGACTAC GTGGTGGAGG CCGCGCTGCT GTCGAAGGCG
GTGGGGGCGC CCGTCAAGCT GACGTTCACG CGCGAGGACG ACATCGCACA CGACTATTTC
CACGCGGTGT CGCTGGAAGC GTTCGACGGC GGCCTCGATG CGGCGGGGAA GGTGGTCGCG
TGGCAGCATC GCACGGTCGC GCCGTCGATC CAGTCGACCT TCAGGGCCGG CGTCGTGCAC
GAGCAGCCGG GCGAGCTCGC GCAGGGTATC GCCGATCTGC CGTTCGCAGT CCCGAACGTA
CGGATCGAGA ACCCGGCCGC GCAAGCGCAC ACGCGGATCG GCTGGTTCCG TTCGGTGTAC
AACATTCCGC ACGCGTTCGG GATCCAGAGC TTCGTGTCGG AACTCGCGCA CGCGGCGGGC
CGCGACCCGA AGGATTTCCT GCTCGACCTG ATCGGGCCGG CGCGGCGTTT CGAGCCGCAC
ATCACGGTGA AGAACGTGAA CTACGGCGAG GATCCGGCGT TGTATCCGGT CGACACCGGA
CGGCTGCGGC GCGTGATCGA GACGGTCGCG CGCGAAGCCG GCTGGGGCCG CAAGCTGCCG
AAGGGGCACG GGCTGGGGAT CGCCGCGCAT CGCAGCTTCG TGTCGTACAC GGCGGTCGTG
TGCGAAGTGC AGGTGGCCGC GGACGGCGCG ATTTCGGTGC CGCGTGTCGA CATCGCGATC
GACTGCGGGC CGCAGGTCAA CCCGGAGCGC GTGCGCTCGC AACTCGAAGG CGCGGTGGTG
ATGGGGCTCG GCATCGCGTT GCACGGCGAG ATCACGTTCA AGGACGGGCA ACCGGAGCAG
AGCAATTTCA ACGGCTTCCA GGTGCTCAGG ATGAACGAGG CGCCGCGTGA AATCCGCGTG
CATCTGGTCG CGCCGGACGA CTACGCGACA CCGCTCGGCG GCGTGGGCGA GCCGGGCCTG
CCGCCGGTCG CGCCGGCGCT GACCAACGCA ATCTTCGCGG CAACCGGCAC GCGGATTCGC
AGCCTGCCCG TCGCTGATCA GCTCGCGAAG CAAAAGGTCG GTTGA
|
|---|
| Protein sequence | MNAPELSVHN ESRRALLLGF ASGGLLLAFG VPSLARAAAP VQPPVSPNPQ YGGAGMPHGL
RDDPHLFVAI APDGTVTVTC IRSEMGQGVR TSVALVVADE LGADWARVKV AQAVGDEPRY
GNQNTDGSRS LRQSFAALRR AGAAARTMLE QAAAATWGVD VRQVKATVHE VVDTKTGRKL
GFGELAAKAA ALPVPDTKSV ALKAPAEFRY IGKGETALID GRDIVGGRAH YGIDTRLDGM
LYAVVARPPA YGDTVASFDA SAAEKLPGVV KVVQLASAPL PSGFQPLGGV AVIARDTWTA
IQARARLKID WKRGPHAGYD SAAYRKTLEA AAAQPGDVIR DDGDTAAALA GAAKRVRATY
YIPHLAHATM EPPAAVARVA DGRCEVWTCT QAPQTTRDEI AKALALPSER VTVNVTLLGG
GFGRKSKPDY VVEAALLSKA VGAPVKLTFT REDDIAHDYF HAVSLEAFDG GLDAAGKVVA
WQHRTVAPSI QSTFRAGVVH EQPGELAQGI ADLPFAVPNV RIENPAAQAH TRIGWFRSVY
NIPHAFGIQS FVSELAHAAG RDPKDFLLDL IGPARRFEPH ITVKNVNYGE DPALYPVDTG
RLRRVIETVA REAGWGRKLP KGHGLGIAAH RSFVSYTAVV CEVQVAADGA ISVPRVDIAI
DCGPQVNPER VRSQLEGAVV MGLGIALHGE ITFKDGQPEQ SNFNGFQVLR MNEAPREIRV
HLVAPDDYAT PLGGVGEPGL PPVAPALTNA IFAATGTRIR SLPVADQLAK QKVG
|
|---|
| |