| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1226 |
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| Symbol | |
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| ID | 4309957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 1337837 |
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| End bp | 1338784 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638149035 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_773118 |
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| Protein GI | 115351279 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.805886 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAC TATCCGTACT GGCAGCGGCG GCAATCTTGT GCGCGATGTT CGGCGCGCAT
GCGCAGGCCG CCGGAGGCGA AATTGCCGTG ATCGTGAAGA CGGCCAATTC GAACTACTGG
CAGAACGTGC AGAAAGGCGC CACCGCCGCC ATGGCCAATG CGAAGGGATA CACGATGACG
TTCCAGGGTC CCGCCGCGGA ATCGGCGATC GCCGACGAAG TCAACATGGT CGAGAACGCG
GTGAACCGGC ATGTCGCCGG CATCGTCCTC GCGCCGTCGG ATCCGGATGC ACTCGTGCCG
GCCATGAAGA AAGCGTGGGA AGCACATATT CCGGTGGTGT TGATCGACTC GACCGTATCC
GATGCCGGCA AGCAGTACTA CCAGTCGTTC CTGTCGACCG ACAACGCGAA AGCCGGTGAG
CTCTGCGCGA AGGCGATGAT CGACCGCGTC GGGCAGACCG GCAAGGTCGC GGTCATGTCG
TACGTGCCGG GTGCCGGTTC GGAAGTCGGC CGCGTCGGCG GATTCCGCAA GTACATCGCC
GCGCATTCGA AGTTGCAGGT GGTGGGGCCG TTCTATTCGC AGTCGCAGAT GGCGAATGCG
CTGAACCAGA CGACCGACGT CCTGTCGGCG AACCCCGACC TCAAGGGCAT TTTCGGCGCC
AACGAACCGA CCGCCGTCGG GATGGGGCGC GCGCTGCAGC AGTCGGGCAA AGGCGGCAAG
GTCGTGGCGA TCGGTTTCGA CGGCAATCAG GACCTCCAAG GATTCGTTCG AGACGGCACG
ATTCAGGCCA TCGCCGTTCA GAGCTCGTAC CAGATGGGCT ACAAGGGCAT CGAGACCCTC
GTCAACGTGA TCGAGCGCAA GCCTGTTTCC AAGCAGGTGG ACACGGGCGT GCTGATGGTC
GAAAAGCAGA ACCTCGACTC GCCCGCGGCG AAGAACGTCC TGTACTGA
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| Protein sequence | MKKLSVLAAA AILCAMFGAH AQAAGGEIAV IVKTANSNYW QNVQKGATAA MANAKGYTMT
FQGPAAESAI ADEVNMVENA VNRHVAGIVL APSDPDALVP AMKKAWEAHI PVVLIDSTVS
DAGKQYYQSF LSTDNAKAGE LCAKAMIDRV GQTGKVAVMS YVPGAGSEVG RVGGFRKYIA
AHSKLQVVGP FYSQSQMANA LNQTTDVLSA NPDLKGIFGA NEPTAVGMGR ALQQSGKGGK
VVAIGFDGNQ DLQGFVRDGT IQAIAVQSSY QMGYKGIETL VNVIERKPVS KQVDTGVLMV
EKQNLDSPAA KNVLY
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