Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_1223 |
Symbol | |
ID | 4309954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 1334864 |
End bp | 1335871 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638149032 |
Product | alcohol dehydrogenase |
Protein accession | YP_773115 |
Protein GI | 115351276 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
TIGRFAM ID | [TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.135954 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCAGCA TCATTTGCGA ATCGCCCGGC GTACTGCGCC ACGAAGATCG CGCACCGCCT TCCCGCGCCG ATGGCGAGAT ATTGTTGCGC GTGCAGCGAG TCGGTATTTG CGGCACCGAC ATGCATATCT ATTCGGGCAA TCAACCGTAC CTGCAATATC CGCGCGTCAT GGGCCATGAA CTGTCCGCGA TCGTGGCCGA GGCCGATCCC GGCGCGCATG TCGTGCCAGG AGACGCGGTC TATGTGATGC CCTATCTGTC ATGCGGACAG TGCATCGCGT GCCGACAGGG CAAGACCAAT TGCTGCGTCA ACATCAAGGT GCTCGGCGTG CATCGCGACG GCGCGTTGAC CGAATATCTG TCGGTGCCCG CGCAGTTCGT GCACAAGGCC GAAGGGGTCA CGCTGGACCA GGCGGCAATG ATCGAATTCC TGGCCATCGG TGCGCACGCG GTGCGGCGTG CTGCCGTGTC CGCCGGCCAA AGAATCCTCG TGGTCGGTGC GGGGCCGATC GGCATGGCGG CGATGCTGTT CGCCCAGCTG AGAGGCGCAC ACGTCACGTG CCTGGACACG CGCGCCGATC GCCTTGCGTT CTGCCAAGAA CACTTCGCCG TTGCGACGGT GCAGACGGGG CCGACCGACG TCGACGAATT GTCGACGATG ACCAACGGCG AGTTCTTCGA CGTGGTGTTC GATGCGACGG GTAACGTGAA GGCCATGAAT CGCGGTTTCG AGTTCATTGC CCACGGCGGC AAGTACGTGC TGATTTCGAT TGTCCCCGGC GAGATCACGT TCTCCGATCC GGAGTTTCAC AAGCGCGAAG CCACCCTGCT CGGCAGCCGC AACGCCACCG CCGAAGACTT CGAGACGGTC CTCGACGCGA TGCGCGCCGG CCGCATTCCG GACAAGGCGC TCAATACACA TCGGATGAGC CTGTCGGACG TTCCCGTCGA GTTCCCGAAA CTGATGGAAC CCGGGCAGAC CGTCGTCAAG GCGCTGGTCG AGTGCTGA
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Protein sequence | MLSIICESPG VLRHEDRAPP SRADGEILLR VQRVGICGTD MHIYSGNQPY LQYPRVMGHE LSAIVAEADP GAHVVPGDAV YVMPYLSCGQ CIACRQGKTN CCVNIKVLGV HRDGALTEYL SVPAQFVHKA EGVTLDQAAM IEFLAIGAHA VRRAAVSAGQ RILVVGAGPI GMAAMLFAQL RGAHVTCLDT RADRLAFCQE HFAVATVQTG PTDVDELSTM TNGEFFDVVF DATGNVKAMN RGFEFIAHGG KYVLISIVPG EITFSDPEFH KREATLLGSR NATAEDFETV LDAMRAGRIP DKALNTHRMS LSDVPVEFPK LMEPGQTVVK ALVEC
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