Gene Bamb_1223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1223 
Symbol 
ID4309954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp1334864 
End bp1335871 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content63% 
IMG OID638149032 
Productalcohol dehydrogenase 
Protein accessionYP_773115 
Protein GI115351276 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID[TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.135954 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAGCA TCATTTGCGA ATCGCCCGGC GTACTGCGCC ACGAAGATCG CGCACCGCCT 
TCCCGCGCCG ATGGCGAGAT ATTGTTGCGC GTGCAGCGAG TCGGTATTTG CGGCACCGAC
ATGCATATCT ATTCGGGCAA TCAACCGTAC CTGCAATATC CGCGCGTCAT GGGCCATGAA
CTGTCCGCGA TCGTGGCCGA GGCCGATCCC GGCGCGCATG TCGTGCCAGG AGACGCGGTC
TATGTGATGC CCTATCTGTC ATGCGGACAG TGCATCGCGT GCCGACAGGG CAAGACCAAT
TGCTGCGTCA ACATCAAGGT GCTCGGCGTG CATCGCGACG GCGCGTTGAC CGAATATCTG
TCGGTGCCCG CGCAGTTCGT GCACAAGGCC GAAGGGGTCA CGCTGGACCA GGCGGCAATG
ATCGAATTCC TGGCCATCGG TGCGCACGCG GTGCGGCGTG CTGCCGTGTC CGCCGGCCAA
AGAATCCTCG TGGTCGGTGC GGGGCCGATC GGCATGGCGG CGATGCTGTT CGCCCAGCTG
AGAGGCGCAC ACGTCACGTG CCTGGACACG CGCGCCGATC GCCTTGCGTT CTGCCAAGAA
CACTTCGCCG TTGCGACGGT GCAGACGGGG CCGACCGACG TCGACGAATT GTCGACGATG
ACCAACGGCG AGTTCTTCGA CGTGGTGTTC GATGCGACGG GTAACGTGAA GGCCATGAAT
CGCGGTTTCG AGTTCATTGC CCACGGCGGC AAGTACGTGC TGATTTCGAT TGTCCCCGGC
GAGATCACGT TCTCCGATCC GGAGTTTCAC AAGCGCGAAG CCACCCTGCT CGGCAGCCGC
AACGCCACCG CCGAAGACTT CGAGACGGTC CTCGACGCGA TGCGCGCCGG CCGCATTCCG
GACAAGGCGC TCAATACACA TCGGATGAGC CTGTCGGACG TTCCCGTCGA GTTCCCGAAA
CTGATGGAAC CCGGGCAGAC CGTCGTCAAG GCGCTGGTCG AGTGCTGA
 
Protein sequence
MLSIICESPG VLRHEDRAPP SRADGEILLR VQRVGICGTD MHIYSGNQPY LQYPRVMGHE 
LSAIVAEADP GAHVVPGDAV YVMPYLSCGQ CIACRQGKTN CCVNIKVLGV HRDGALTEYL
SVPAQFVHKA EGVTLDQAAM IEFLAIGAHA VRRAAVSAGQ RILVVGAGPI GMAAMLFAQL
RGAHVTCLDT RADRLAFCQE HFAVATVQTG PTDVDELSTM TNGEFFDVVF DATGNVKAMN
RGFEFIAHGG KYVLISIVPG EITFSDPEFH KREATLLGSR NATAEDFETV LDAMRAGRIP
DKALNTHRMS LSDVPVEFPK LMEPGQTVVK ALVEC