Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_1205 |
Symbol | |
ID | 4309936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 1320695 |
End bp | 1321114 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638149014 |
Product | putative TIS1421-transposase orfA protein |
Protein accession | YP_773097 |
Protein GI | 115351258 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3293] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.482894 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGCTGC GAACGTCATA TCGTCGCGGC ATGGCGAGAC GCAAAATCAG TAACGAGTTG TGGGTGGTGC TGGAACCGTT GATTTCGGCG TTCACGCCAT CTCCCAAGGG CGGGCGGCGG CACACGGTCG ATGATCGAGC AGCGCTGAAC GGCATCCTGA ATGTACTGCA GACCGGTATT CCTTGGGAAG ACCTCCCCCA GGAGTTGGGC TTCGGCAGCG GTATGACGTG CTGGCGACGT CTACGAGACT GGCAGGACGC CGGCGTATGG GAGCGGCTGC ATCTGGCGAT GCTTCGTCGG CTGCGCGAGC ATGATCAGAT CGATTGGGAA CGGGCAAGTC TCGATGGAGC CAGTGTCTCC AGCCCCCGGG GGGCCAAGAA ACCGGCCCTA TCCCGACAGA TCGGGTGTCG GGCGTCATAG
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Protein sequence | MRLRTSYRRG MARRKISNEL WVVLEPLISA FTPSPKGGRR HTVDDRAALN GILNVLQTGI PWEDLPQELG FGSGMTCWRR LRDWQDAGVW ERLHLAMLRR LREHDQIDWE RASLDGASVS SPRGAKKPAL SRQIGCRAS
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