Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_1199 |
Symbol | |
ID | 4309930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 1313313 |
End bp | 1314683 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638149007 |
Product | MATE efflux family protein |
Protein accession | YP_773091 |
Protein GI | 115351252 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.281549 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGATT CCGCATTACC GCACGCAGTC GGCACCGGAT CGGCCGTCGT CTCGCACCGG CGCGTCCTCG CGCTCGCGTT CCCGATCGTC CTGGCGAACC TGACCCAGCC GATCCTCGGC GCGGTGGACA CGGCCGTCGC CGGCCACCTC GACGGCGCGC AGTATCTCGG CGGCGTCGCG CTCGGCGGAC TGTTCTTCAA TTTCGTGTTC TGGGGCTTCG GCTTCCTGCG CATGGGCACG ACCGGCCTCG TCGCGCAGGC GCACGGCGCC GGCGACGCGG CCGGCATCCG CCTGAACGTG CTGCGCGCGC TGATCGTCGC GTTCGCGCTC GGCGCCGCGG TGCTCGCGCT GCAGGTGCCG CTGCTGTCGT TCGCGCTGTC CGCGCTGGGC GGCAGCGACG CGGTGCGCGC AACTGCGCTG GCCTACGGCC ACGCGCGGAT CTGGAGCGCA CCGTTCGCGC TCGCGAACTA CGTCGTGCTC GGCTACCTGC TCGGCGTGCA GCGCGTGCGG CTCGCGCTCG TCGCGCAGGT CTTCATCAAT GCGGTGAACA TCGGTGCCGT GCTGTTGTAC GTGTACGGCT TCGGCTGGGG CATTGCCGGG ATCGGTGCGG CGACCGCGAC CGCCGACGCA TGCGGCTTCG CGCTCGGCGC CTGGATGCTA TGGCAGCTGC GGCCGCGCGG CCTCGCGCCC ATCCCCACGC GTGCGCTGGC GGACCGTGCG GCGCTCAAGC GGCTGATCGT GCTCAATCGC GACATCTTCC TGCGCACGAT GTGCCTGCTC GGCGCGTTCG GCTGGTTCGC GCATGTCGGC GCGAAACAGG GCGATGCGAC GCTCGCGGCC AACGCTTTGC TGCTGAATTT TCAGACATTC ATGGCGTACG GGCTGGACGG CTTCGCGCAT GCGGCCGAGG CGCTCGTCGG CGCCGCGGCC GGCGCGCGCG ACCGCGCCGG ATTCCGGCAG GCCGTGCGCG TCACGTTGCT GTGGTCCGCG CTCGGTGCGC TGCTGTTCGC GCTCGTCTAC TGGGCGGCCG GCGGATGGAT CGTCGCGCGG CTGACCGACC AGGCCGAGAT CCGTGCGGTC GCGCTGCAAT ACCTGCCATG GGCGGCGATC TCGCCGATCG TGTCCGTGTG GGGGTTCCTG CTCGACGGCG TGTTCATCGG CGCGACGCAG ACGCAATCGC TGATGCGCGC GATGGTCGCG TCGTTCGCGA TCTTCATTGC CGCGACGCTG ACCGTCGTCG GCCCGTTCGG CAATCACGGG CTGTGGTTCG CGCTGCTGTT GTTCATGGTC GCGCGCGGTG CGACGCTCGC ACGCTACCTG CCGGCGCTCG TGCGGCGGAT CAGCGCCGAC GCGCCCGCGG CCGGCGCCTG A
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Protein sequence | MSDSALPHAV GTGSAVVSHR RVLALAFPIV LANLTQPILG AVDTAVAGHL DGAQYLGGVA LGGLFFNFVF WGFGFLRMGT TGLVAQAHGA GDAAGIRLNV LRALIVAFAL GAAVLALQVP LLSFALSALG GSDAVRATAL AYGHARIWSA PFALANYVVL GYLLGVQRVR LALVAQVFIN AVNIGAVLLY VYGFGWGIAG IGAATATADA CGFALGAWML WQLRPRGLAP IPTRALADRA ALKRLIVLNR DIFLRTMCLL GAFGWFAHVG AKQGDATLAA NALLLNFQTF MAYGLDGFAH AAEALVGAAA GARDRAGFRQ AVRVTLLWSA LGALLFALVY WAAGGWIVAR LTDQAEIRAV ALQYLPWAAI SPIVSVWGFL LDGVFIGATQ TQSLMRAMVA SFAIFIAATL TVVGPFGNHG LWFALLLFMV ARGATLARYL PALVRRISAD APAAGA
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