| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1191 |
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| Symbol | |
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| ID | 4311196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 1304226 |
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| End bp | 1306337 |
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| Gene Length | 2112 bp |
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| Protein Length | 703 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638148998 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_773083 |
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| Protein GI | 115351244 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAATGT CAGAAATTGC GAGCTTCTTC CAGCTCCAGA GCAATCGCCT GTTTACGATC
GAAACGCCAT TGAAAGGTCG ATCGGATTTG GTGCTCGTTG ACTTCCATTG TACCGAGGGG
TTATCTCAGA ATTTCGAGAC CCACGTTCGA CTCGCGTCTC AAGATAAGAA CATCGAACTG
AAAAAGTTGA TCGGTCAGCC GGTGACGATT ACCTTGCAGT TGACCGATGC GCTCGCCAGT
TCCGAAGAGC GCTATTTCCA CGGATATGTT GCAGCGTTTT CGCATCTCGA CACCGATGGC
GGTTTTGCGA TGTATAGCGC GACGATTCTG CCGTGGCTCT GGATGCTCTC TCGTCGACAG
GACATCCGGA TCTTCCAGGA AGAGAACACC GAGGCGATCC TCTCACGTGT GTTCCGGGAG
TATGGAAAGC TCGCGTCGTT CGAGTTCCGT CTGTCGAAGG GAACGACGAA TCGCAGCTAT
TGCACTCAGT ACCGAGAGAC GGACCTTGCG TTTGTCGAAC GGCTGATGCG AGAGGATGGC
CTGTTCTACT ACTTCGAGCA CGCTAAGGAC GGGCATAAGC TGATCATCGC GGATAACTCG
GTGACGGCCA AGCCGATCGA CGGGCGCAGT CCGTCATTAC AGTACAACCA GGACGAGCCG
CTCGATAATC TGGCCGTCGT CACGTCGTTT CAGGCGCAAC GTCACCTTGC CCCTAGCACG
GTGGGATTGA AGACCTTCGA CTACAAGATC CCTCAGGCAC GGCGATTCGC TTCGGGCGGG
ACAGCGGTCA ACCAAGGCGA GGTGCCTTCC TACGAAATCT ACGACTATCT TGGGGAACAT
GGCTTTGCCG ATAGCGATCG GGGTGAGGAA CTCACGCGCT TCCGAACAGA GGCGCTCGCC
GCGCACAGCA AGACGTTCTC CGGGGTGACA ACTAGTCGGC GGATGATGCC GTGCCGATAC
TTCGAGCTGG ACGACCACTA CGATCATGGG AGTACCAAAC AGGAAGACCG CCAGTTTCTG
TTGCTGACTG TATCGCACAC CGGCACGAAC AACTATGAGC CCGGCGAGGG AAGTTCGGCG
TACTCATGTA GCTTTACCTG CATTCGCAAG AAAATTCCGT ACCGTCCGGC GTTCGAGGGC
GAGCGTCCGA CGATTGTCGG GCCGCAGACG GCGATCGTCG TCGGCCCGAA AGGCGAGGAG
ATTTATACCG ATAGCCTGGG CCGCGTGAAG GTCCAGTTTC ACTGGGATCG CCTCGGCAAG
CGCGATCAGG GCAGCTCATG CTGGGTGCGG GTGAGTCAGC CGTGGGCGGG TAGCGGGTTT
GGCATGGTTC AGATTCCGCG AATCGGGGAC GAAGTGGTCG TGAGTTTTCT TGACGGAAAT
CCGGACCGTC CGCTGGTAAC GTCGCGCGTC TACAACTCGC AGAACATGCC GCCTTGGGAA
CTTCCGGCCA ACGCGACGCA GAGCGGGATT CTCACGCGCT CGACCAAGAC CGGTAACGTC
AATACCGCCA ATGCAATTCG GTTCGAGGAC AAGAAGGGCG CGGAAGAGGT GTGGCTGCAT
GCCGAGAAGG ATCAGCGCAT CGAGGTCGAG CACGACGAGT CGCACTGGGT CGGCAATGAT
CGTCGCAAGA ATATCGATCA CGATGAGACG GTTCATGTCG GCCACGATCG GACCGAGACG
GTCGATAACA ACGAGACCAT CCATATCGGC GTGGATCGGA CGGAAACCGT TGGCAATAAC
GAAACACTGA CGGTCGGCGG CAATCGGAAT GAAACGATCC AGGGGATGGA GAACCTGTTG
ATCGCATTGA CGTCGACGGA AACGGTGGGG CTCGCAAAGG CACTGACCGT GGGTGGTGGC
TATCAGGTGA CGGTGGCCGG CGCAGTCAAT ACGTCGGCGG GGCTCGCCAG TGCCGAAGAA
GTGGGGTTGT CGAAGACCAC GATGGTCGGC AAGACGTACA CGATCACGGC TGGCGACCGG
ATCGAGTTGA AGACCGGTAG CTCGGTGCTC ATCATGGAGA GCAACGGACA CATCACGCTG
CGCGGCACGC AACTGTTGAT CGAGGGCTCT GGGCCGGTGC AGATCAACGG CAAGGATGTC
GACGTCAACT GA
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| Protein sequence | MQMSEIASFF QLQSNRLFTI ETPLKGRSDL VLVDFHCTEG LSQNFETHVR LASQDKNIEL
KKLIGQPVTI TLQLTDALAS SEERYFHGYV AAFSHLDTDG GFAMYSATIL PWLWMLSRRQ
DIRIFQEENT EAILSRVFRE YGKLASFEFR LSKGTTNRSY CTQYRETDLA FVERLMREDG
LFYYFEHAKD GHKLIIADNS VTAKPIDGRS PSLQYNQDEP LDNLAVVTSF QAQRHLAPST
VGLKTFDYKI PQARRFASGG TAVNQGEVPS YEIYDYLGEH GFADSDRGEE LTRFRTEALA
AHSKTFSGVT TSRRMMPCRY FELDDHYDHG STKQEDRQFL LLTVSHTGTN NYEPGEGSSA
YSCSFTCIRK KIPYRPAFEG ERPTIVGPQT AIVVGPKGEE IYTDSLGRVK VQFHWDRLGK
RDQGSSCWVR VSQPWAGSGF GMVQIPRIGD EVVVSFLDGN PDRPLVTSRV YNSQNMPPWE
LPANATQSGI LTRSTKTGNV NTANAIRFED KKGAEEVWLH AEKDQRIEVE HDESHWVGND
RRKNIDHDET VHVGHDRTET VDNNETIHIG VDRTETVGNN ETLTVGGNRN ETIQGMENLL
IALTSTETVG LAKALTVGGG YQVTVAGAVN TSAGLASAEE VGLSKTTMVG KTYTITAGDR
IELKTGSSVL IMESNGHITL RGTQLLIEGS GPVQINGKDV DVN
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