Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_1174 |
Symbol | |
ID | 4311179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 1283728 |
End bp | 1285623 |
Gene Length | 1896 bp |
Protein Length | 631 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638148981 |
Product | ATP-dependent metalloprotease FtsH |
Protein accession | YP_773066 |
Protein GI | 115351227 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.378107 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAACAACA ATATGTTTTC GAAGGCAGCA GTGTGGCTGG TGATCGCACT GGTGCTGTTT ACGGTGTTCA AGCAGTTCGA CAAGCCCCGC GTCCAGGAAG GTGTGTCCTA TTCGCAGTTC ATGGACGACG CCAAGAACGG CAAGGTCAAG AACGTCATCG TGCAGGGGCG CAACCTCACC GTCACTCCGT CTGATGGCCA GAAATACCAG ATCGTGTCGC CCGGCGACAT CTGGATGGTC GGTGACCTGA TGAAGTACGG CGTGCAGGTC AGCGGCAAGG CGGACGACGA GCCGAACGCG CTGATGTCCG CGCTGTATTA CCTCGGGCCG ACGATCCTGA TCATCGTGTT CTGGTTCTAC ATGATGAGGC AGATGCAGGG GGGCGGCAAA GGCGGCGCAT TCTCGTTCGG GAAATCGCGC GCGCGGCTGA TCGACGAGAA CAACAACGCG GTCAACTTCT CCGACGTCGC GGGCTGCGAC GAAGCGAAGG AAGAAGTGTC CGAGCTCGTC GACTTCCTGC GCGATCCGCA GAAATTCCAG AAGCTGGGCG GGCGCATTCC GCGCGGCGTG CTGCTCGTCG GTCCTCCGGG TACCGGCAAG ACGCTGCTCG CGCGAGCGAT CGCCGGTGAA GCGAAGGTGC CGTTCTTCAG CATCTCGGGT TCCGACTTCG TCGAAATGTT CGTCGGTGTC GGCGCGGCCC GTGTGCGCGA CATGTTCGAG CAGGCGAAGA AGCACGCACC GTGCATCGTG TTCATCGACG AAATCGACGC GGTCGGTCGT CATCGCGGCG CCGGCATGGG CGGCGGCAAC GACGAGCGCG AGCAGACGCT GAACCAGATG CTGGTCGAGA TGGACGGCTT CGAGGCGAAC TCCGGCGTGA TCGTGATCGC CGCGACCAAC CGTTCCGACG TGCTCGACAA GGCGCTGCTG CGTCCGGGCC GTTTCGACCG TCAGGTCTAT GTCGGCCTGC CGGACATCCG CGGCCGCGAG CAGATCATGC GCGTGCACCT GCGCAAGGTG CCGATCGCGA ACGACGTCGA TGCAGCAGTC ATCGCGCGCG GCACGCCGGG TTTCTCGGGC GCCGATCTCG CGAACCTCGT GAACGAAGCG GCGCTGTTCG CCGCCCGTCG CGGCAAGCGC ATCGTCGAGA TGCAGGATTT CGAGGACGCG AAGGACAAGA TCTTCATGGG TCCGGAGCGC AAGTCGGCGG TGATTCGCGA AGAAGCGAAG CGCGCGACGG CTTACCACGA GTCGGGCCAC GCGGTGATCG CGAAGCTGCT GCCGAAGGCC GACCCGGTGC ACAAGGTCAC GATCATTCCG CGCGGTCGCG CGCTGGGCGT CACGTGGCAG CTGCCGGAGC ATGACAACGA GACGTACTCG AAGGACTACC TGCTCGATCG CCTGGCGATC CTGTTCGGTG GTCGCGTGGC CGAGGAGCTG TTCCTGAACC TGATCAGCAC CGGCGCGTCG GACGACTTCA ACAAGGCGAC GCAGACGGCA CGCGCGATGG TGGCCCGTTT CGGCATGACC GACGCCCTCG GGCCGATGGT CTACGTCGAC GACGAGAGCG ATAACGGCCC GTTCGGCCGC GGCTTCACGC GCACGATCTC GGAAGCGACG CAGCAGAAGG TCGACGGCGA AATCCGTCGT GTGCTCGACG AACAGTACAA CCTTGCGCGC CGCCTGCTCG AAGAGAACCG CGACAAGGTC GAAGCGATGA CGGCCGCGCT GATGGAGTGG GAAACGATCG ACGCCGATCA GATCAACGAC ATCATGGAAG GGCGTCCGCC GCGCTCGCCG AAGAGCTCGC CGGCTGTCGG CGGCGACTCG TCGGGTGGTG GCACGACCGC CGAAGTGAAG CCGGCCAACG CGCCGGCGCC TGCTTCGCCG GCCTGA
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Protein sequence | MNNNMFSKAA VWLVIALVLF TVFKQFDKPR VQEGVSYSQF MDDAKNGKVK NVIVQGRNLT VTPSDGQKYQ IVSPGDIWMV GDLMKYGVQV SGKADDEPNA LMSALYYLGP TILIIVFWFY MMRQMQGGGK GGAFSFGKSR ARLIDENNNA VNFSDVAGCD EAKEEVSELV DFLRDPQKFQ KLGGRIPRGV LLVGPPGTGK TLLARAIAGE AKVPFFSISG SDFVEMFVGV GAARVRDMFE QAKKHAPCIV FIDEIDAVGR HRGAGMGGGN DEREQTLNQM LVEMDGFEAN SGVIVIAATN RSDVLDKALL RPGRFDRQVY VGLPDIRGRE QIMRVHLRKV PIANDVDAAV IARGTPGFSG ADLANLVNEA ALFAARRGKR IVEMQDFEDA KDKIFMGPER KSAVIREEAK RATAYHESGH AVIAKLLPKA DPVHKVTIIP RGRALGVTWQ LPEHDNETYS KDYLLDRLAI LFGGRVAEEL FLNLISTGAS DDFNKATQTA RAMVARFGMT DALGPMVYVD DESDNGPFGR GFTRTISEAT QQKVDGEIRR VLDEQYNLAR RLLEENRDKV EAMTAALMEW ETIDADQIND IMEGRPPRSP KSSPAVGGDS SGGGTTAEVK PANAPAPASP A
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