| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1169 |
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| Symbol | carB |
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| ID | 4311174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 1277791 |
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| End bp | 1281045 |
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| Gene Length | 3255 bp |
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| Protein Length | 1084 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638148976 |
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| Product | carbamoyl phosphate synthase large subunit |
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| Protein accession | YP_773061 |
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| Protein GI | 115351222 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAAAC GCACAGACAT CAAAAGCATC CTCATCATCG GCGCCGGCCC GATCATCATC
GGCCAGGCTT GCGAGTTCGA CTATTCGGGC GCGCAGGCTT GCAAGGCGCT GCGTGAAGAG
GGCTACAAGG TCGTCCTCGT GAACAGCAAC CCGGCGACGA TCATGACCGA CCCGAATACG
GCCGACGTCA CGTACATCGA GCCGATCACG TGGGAAGTCG TCGCACGCAT CATCGAGAAG
GAGCGCCCGG ACGCGATCCT GCCGACGATG GGCGGCCAGA CCGCGCTGAA CTGCGCGCTC
GACCTGCATC ACCACGGCGT GCTCGAGAAA TTCGGCGTCG AGCTGATCGG CGCGTCGCCG
GAAGCGATCG ACAAGGCGGA AGATCGCCAG AAGTTCAAGG ACGCGATGAC CAAGATCGGT
CTCGGCTCGG CGAAGTCGGG CATCGCGCAC TCGATGGAAG AAGCGACCCA GGTGCACGCC
GAGATCATGG CGTACACCGG CGGCAGCGGC TATCCGATCG TGATCCGTCC GTCGTTCACG
CTCGGCGGCT CGGGCGGCGG CATCGCGTAT AACCGCGAAG AGTTCGAAGA GATCTGCAAG
CGCGGCCTCG ACCTGTCGCC CACGCGCGAA CTGCTGATCG AGGAATCGCT GCTCGGCTGG
AAGGAATACG AGATGGAAGT CGTGCGCGAC CGCGCCGACA ATTGCATCAT CGTGTGCTCG
ATCGAAAACC TCGACCCGAT GGGCGTGCAC ACCGGCGACT CGATCACGGT CGCGCCGGCG
CAGACGCTCA CCGACAAGGA ATACCAGATC CTGCGCAACG CATCGCTCGC GGTGCTGCGC
GAGATCGGCG TCGACACGGG CGGCTCGAAC GTGCAGTTCT CGATCAACCC GAAGGACGGC
CGCATGGTCG TCATCGAGAT GAACCCGCGC GTGTCGCGTT CGTCGGCGCT CGCGTCGAAG
GCGACCGGCT TCCCGATCGC GAAGGTCGCG GCGAAGCTGG CGGTCGGCTA CACGCTCGAC
GAGCTGAAGA ACGAAATCAC CGGCGGCCAG ACGCCGGCGT CGTTCGAGCC GACGATCGAC
TACGTCGTCA CGAAGATTCC GCGTTTCGCG TTCGAGAAGT TCCGTGAAGC CGATTCGCGC
CTGACCACGC AGATGAAGTC GGTCGGCGAA GTGATGGCGA TCGGCCGCAC GTTCCAGGAA
TCGTTCCAGA AGGCGCTGCG CGGCCTCGAA GTCGGCGTCG ACGGTCTCGA CGAGAAGTCG
ACCGACCGCG ACGAGATCGC GATCGAGATC CACGAGCCGG GCCCGGATCG CATCTGGTAC
GTCGGCGATG CATTCCGCAT CGGCATGACG GCCGAAGAGA TCTTCGCGGA AACCGCGATC
GACCCGTGGT TCCTCGCGCA GATCGAGCAG ATCATCCTGA AGGAAAAGGC GTTGTCGGGC
CGCACGCTCG CGTCGCTGAC GTTCGACGAG CTGCGCTTCC TGAAGCAGAG CGGCTTCTCC
GACCGCCGCC TCGCGAAGCT GCTCGGCGCG ACGCCGGAAG ACGTCCGCAA GCGCCGCGTG
GAACTGAACG TGCGCCCGGT CTACAAGCGC GTCGACACCT GCGCGGCCGA GTTCGCGACG
AAAACCGCGT ACATGTACTC GACCTACGAG GAAGAGTGCG AGGCGCAGCC GACCACCAAC
AAGAAGATCA TGGTGCTGGG CGGCGGCCCG AACCGGATCG GCCAGGGCAT CGAGTTCGAC
TACTGCTGCG TGCACGCGGC CCTCGCGATG CGCGAGGACG GCTACGAAAC GATCATGGTC
AACTGCAACC CGGAAACGGT GTCGACCGAC TATGACACGT CCGACCGCCT GTACTTCGAG
CCGCTGACGC TCGAGGACGT GCTGGAAATC GTCGACAAGG AAAAGCCGGT CGGCGTGATC
GTCCAGTACG GCGGCCAGAC GCCGCTGAAG CTCGCGCTCG ACCTCGAGGC GCATGGCGTG
CCGATCGTCG GCACGTCGCC GGACATGATC GACGCGGCCG AAGACCGCGA ACGCTTCCAG
AAGCTGCTGC AGGATCTCGG CCTGCGCCAG CCGCCGAACC GCACCGCGCG CGCCGAAGAA
GAAGCGCTCG CGCTGGCGGC CGAAATCGGC TACCCGCTCG TCGTGCGCCC GTCGTACGTG
CTGGGCGGCC GCGCGATGGA AATCGTCCAC GAGCCGCGCG ACCTCGAGCG CTACATGCGC
GAGGCCGTGA AGGTGTCGAA CGATTCGCCG GTGCTGCTCG ACCGCTTCCT GAACGACGCG
ATCGAATGCG ACGTCGACTG CATCTGCGAC GGCGAAGCGG TGTTCATCGG CGGCGTGATG
GAGCACATCG AGCAGGCAGG CGTCCACTCG GGCGACTCGG CATGCTCGCT GCCGCCGTAC
TCGCTGTCGA AGGAAACCGT GGCCGAGCTG AAGCGCCAGA CGGGCGCGAT GGCGAAGGCG
CTGAACGTGG TCGGCCTGAT GAACGTGCAG TTCGCGATCC AGCAGGTGCC GCAGGCGGAC
GGCTCGAAGC AGGACATCAT CTACGTGCTC GAAGTGAACC CGCGCGCCTC GCGCACGGTG
CCGTACGTGT CGAAGGCGAC CAGCCTGCCG CTCGCGAAGA TCGCGGCGCG CGCGATGGTC
GGCCAGAAGC TCGCGCAGCA GGGCGTGACG AAGGAAGTCG AGCCGCCGTA CTTCAGCGTG
AAGGAAGCGG TGTTCCCGTT CGTCAAGTTC CCGACCGTCG ATCCGGTCCT CGGGCCTGAA
ATGCGTTCGA CCGGCGAAGT GATGGGTGTC GGCCAGACGT TCGGCGAAGC GCTGTTCAAG
TCGCAGCTCG CGGCCGGTTC GCGCTTGCCG GAGTCGGGCA CGGTGCTGCT GACCGTGATG
GACGCCGACA AGCCGAAGGC CGTCGAAGTC GCGCGCATGC TGCACGACCT CGGCTACCCG
ATCGTCGCGA CCAAGGGCAC GGCTGCCGCG ATCGAAGCGG CCGGCGTGCC GGTGAAGGTC
GTCAACAAGG TGAAGGACGG CCGTCCGCAC ATCGTCGACA TGATCAAGAA CGGCGAGATC
GCACTCGTGT TCACGACGGT CGACGAGACG CGCCAGGCGA TCGCCGATTC GCGTTCGATC
CGCATGAGCG CGCAGGCGCA CAAGGTCACG TACTACACGA CGATGTCGGG CGCGCGCGCG
GCCGTCGAAG GCTTGCGCTA CCTGAAGGAT CTGGAAGTCT ATGATTTACA AGGTCTTCAC
GCTCGCCTAA ACTAA
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| Protein sequence | MPKRTDIKSI LIIGAGPIII GQACEFDYSG AQACKALREE GYKVVLVNSN PATIMTDPNT
ADVTYIEPIT WEVVARIIEK ERPDAILPTM GGQTALNCAL DLHHHGVLEK FGVELIGASP
EAIDKAEDRQ KFKDAMTKIG LGSAKSGIAH SMEEATQVHA EIMAYTGGSG YPIVIRPSFT
LGGSGGGIAY NREEFEEICK RGLDLSPTRE LLIEESLLGW KEYEMEVVRD RADNCIIVCS
IENLDPMGVH TGDSITVAPA QTLTDKEYQI LRNASLAVLR EIGVDTGGSN VQFSINPKDG
RMVVIEMNPR VSRSSALASK ATGFPIAKVA AKLAVGYTLD ELKNEITGGQ TPASFEPTID
YVVTKIPRFA FEKFREADSR LTTQMKSVGE VMAIGRTFQE SFQKALRGLE VGVDGLDEKS
TDRDEIAIEI HEPGPDRIWY VGDAFRIGMT AEEIFAETAI DPWFLAQIEQ IILKEKALSG
RTLASLTFDE LRFLKQSGFS DRRLAKLLGA TPEDVRKRRV ELNVRPVYKR VDTCAAEFAT
KTAYMYSTYE EECEAQPTTN KKIMVLGGGP NRIGQGIEFD YCCVHAALAM REDGYETIMV
NCNPETVSTD YDTSDRLYFE PLTLEDVLEI VDKEKPVGVI VQYGGQTPLK LALDLEAHGV
PIVGTSPDMI DAAEDRERFQ KLLQDLGLRQ PPNRTARAEE EALALAAEIG YPLVVRPSYV
LGGRAMEIVH EPRDLERYMR EAVKVSNDSP VLLDRFLNDA IECDVDCICD GEAVFIGGVM
EHIEQAGVHS GDSACSLPPY SLSKETVAEL KRQTGAMAKA LNVVGLMNVQ FAIQQVPQAD
GSKQDIIYVL EVNPRASRTV PYVSKATSLP LAKIAARAMV GQKLAQQGVT KEVEPPYFSV
KEAVFPFVKF PTVDPVLGPE MRSTGEVMGV GQTFGEALFK SQLAAGSRLP ESGTVLLTVM
DADKPKAVEV ARMLHDLGYP IVATKGTAAA IEAAGVPVKV VNKVKDGRPH IVDMIKNGEI
ALVFTTVDET RQAIADSRSI RMSAQAHKVT YYTTMSGARA AVEGLRYLKD LEVYDLQGLH
ARLN
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