| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1165 |
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| Symbol | |
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| ID | 4311170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 1272540 |
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| End bp | 1274129 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638148972 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_773057 |
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| Protein GI | 115351218 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000346061 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGACTTA TATTGAGTGC GATGGTGGTC CTGCTACTCG CCGCTTGTGC GAGCCAGGCT
CCTGTCGCCA ACAACGCCGC CGATTCGCAG GCGACGTCCA ACTACCTCCG TAAATCAGCC
ACCGCCAAAG AAACTGTCGA CGTCGACAAG CAATCCGTCG GCGACCTGAC CAGTGCGGAC
TCCGATCTCT GGGGCCGCAT CCGTCGCGGC TTCCAGATGC CCGACCTGCA GAGCGACCTC
GTCGACATGC AGACCACGTG GTACACGCAG CGTCCCGATT ACGTGCAGCG CATGACCGAG
CGCTCGCAGA AGTACCTGTA TCACATCGTC GAGGAACTCG AGGCGCGCCA CATGCCGACC
GAGCTCGCGC TGCTGCCGTT CATCGAATCC GCGTACAACC CGCAGGCGCT GTCGGTCGCG
AAGGCGGCCG GCATGTGGCA GTTCATGCCG GGCACGGGCC GCACGTACAA CCTGAAGCGC
AACATGTGGC AGGACGAGCG TCGCGACGTG CTCGCGTCGA CGAGCGCCGC GCTCGACTAC
CTGTCGCGCC TGCATGACAT GTTCGGCGAC TGGTATCTGG CGCTGGCCGC GTACAACTGG
GGCGAGGGCA ACGTGCAGCG CGCGATCGCG CGCAACCAGG CGGCCGGGCT GCCGACCGAC
TACCAGAGCC TGCGGATGCC GAACGAGACG CGCAACTACG TGCCGAAGCT GCAGGCGGTG
AAGAACATCA TCGCGAGTCC GCAGCAGTAT GGCCTCGTGC TGCCTGACAT CCCGAACCAC
CCGTATTTCG TGACGGTCAC GACGTCGCGC GACATCGACG TGGCGGTGGC CGCGAAGCTC
GCGAACCTGT CGCTCGACGA ATTCCGCTCG CTGAACCCGT CGTTCGCGAA GCCGGTGATC
CTCGGCGCGA CCGAGCCGCA GATCCTGCTG CCGTTCGACA ACGCGGCGGC GTTCGAGAAG
AACCTGAAGG CACACAACGG CCAGCTGTCG TCGTGGACCA CCTACACGGT CAGCGAGCGC
GCGCGTCCGG CCGCGATCGC CGAGAAGATC GGTGTCGACG CCGATACGCT GATGTCGATC
AACAAGATTC CGGCCGGCAT GCGCCTGAAG CCGGGTTCGA CGATCGTCGT GCCGCGTGGC
GATGACGACG ACGAGGACAT CAGCGCGGAC GTCGCCGAAA ATGGCGTGCT CGCGATGGAG
CCCGACGTGC CCGACACGCG CAAGATGCTG ATCCGCGTGC GCCGCAAGCA GTCGATGGCC
GCACTCGCCG GCCGCTACGG CGTGTCGGTC GGCCAGCTGA AGGCATGGAA CCGCACGCAC
CGCGATATGG TGATGCCGGG CCAGGCGCTC GTGCTGCACG TGCCGGTCGG CCGTGCGGTG
CCGGCCGAGC CGGGTCCGGA GCGGATCGCG ACGTCGGCGG CCGGCGCGCA TATCGAGCGC
GCGAGCCTGT CCGTCGGCGG CAAGTCGCGT GGCGCGAAGC ACGCCGCCGC GAAGCCGGCG
GCCCGCGCGG CCAAGGCGGC CCCCGCGAGG GCGGCCCCCG CGAAGGCGGC GCCGGCCAAG
GTTGCTGCCA GCAAGAGCAA GAAGAAATAA
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| Protein sequence | MRLILSAMVV LLLAACASQA PVANNAADSQ ATSNYLRKSA TAKETVDVDK QSVGDLTSAD
SDLWGRIRRG FQMPDLQSDL VDMQTTWYTQ RPDYVQRMTE RSQKYLYHIV EELEARHMPT
ELALLPFIES AYNPQALSVA KAAGMWQFMP GTGRTYNLKR NMWQDERRDV LASTSAALDY
LSRLHDMFGD WYLALAAYNW GEGNVQRAIA RNQAAGLPTD YQSLRMPNET RNYVPKLQAV
KNIIASPQQY GLVLPDIPNH PYFVTVTTSR DIDVAVAAKL ANLSLDEFRS LNPSFAKPVI
LGATEPQILL PFDNAAAFEK NLKAHNGQLS SWTTYTVSER ARPAAIAEKI GVDADTLMSI
NKIPAGMRLK PGSTIVVPRG DDDDEDISAD VAENGVLAME PDVPDTRKML IRVRRKQSMA
ALAGRYGVSV GQLKAWNRTH RDMVMPGQAL VLHVPVGRAV PAEPGPERIA TSAAGAHIER
ASLSVGGKSR GAKHAAAKPA ARAAKAAPAR AAPAKAAPAK VAASKSKKK
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