| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1162 |
|---|
| Symbol | |
|---|
| ID | 4311167 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | - |
|---|
| Start bp | 1270311 |
|---|
| End bp | 1270754 |
|---|
| Gene Length | 444 bp |
|---|
| Protein Length | 147 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638148969 |
|---|
| Product | ribonuclease H |
|---|
| Protein accession | YP_773054 |
|---|
| Protein GI | 115351215 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0328] Ribonuclease HI |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.101109 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCG ACACCATCGA CATTTATACC GACGGCGCCT GCAAGGGCAA CCCCGGCCCC
GGCGGCTGGG GCGCCCTGCT GCGCTACGGC GACCGCGAAA AAGAGCTGTT CGGCGGCGAG
CCCAACACGA CCAACAACCG CATGGAACTG ATGGGCGTGA TCGGCGCACT CGAAGCGCTC
AAGCGGCCGT GCCGCGTGAT CGTCCATACC GACTCGCAGT ACGTGCAGAA AGGCATCAGC
GAGTGGATCC ACGGCTGGAA GAAAAAAGGC TGGGTCACCG CGGCGAAGAC GCCGGTGAAG
AACGCCGACC TGTGGAAGCG GCTCGACGCG CTCGTCGTAC AACACGAGAT CGAGTGGCGC
TGGGTGAAGG GCCACGCCGG CCATCCCGAA AACGAACGTG CGGACGCGCT CGCGAATCGC
GGCGTCGAAT CGCTCGTGGC CTGA
|
|---|
| Protein sequence | MTTDTIDIYT DGACKGNPGP GGWGALLRYG DREKELFGGE PNTTNNRMEL MGVIGALEAL
KRPCRVIVHT DSQYVQKGIS EWIHGWKKKG WVTAAKTPVK NADLWKRLDA LVVQHEIEWR
WVKGHAGHPE NERADALANR GVESLVA
|
|---|
| |