Gene Bamb_1150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1150 
Symbol 
ID4308764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand+ 
Start bp1259780 
End bp1260487 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content71% 
IMG OID638148957 
Productmalonate decarboxylase gamma subunit 
Protein accessionYP_773042 
Protein GI115351203 
COG category 
COG ID 
TIGRFAM ID[TIGR03134] malonate decarboxylase, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.945666 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCTCG ATGAAGTCCT GACCTCGCTG TTTCCCAAAG GCCATTCGAT TACGCGCAGC 
GGCGGCCTGC TGACGGGCCA CGCGCTGCTG ACCGGCACGC GCGTCGACGT GATTGGCGTT 
TCCGAGCGCT TGCCGTTCGG CATCGACGAA GCGCTGACGC TCGCGTCGCA CGTGCTCGAC 
ACGATCGAGC GCGGCGGCGA CACGCCGATT CTCGTGCTCG TCGACAGCGA CAGCCAGCGG 
ATGAGCAAGC GCGACGAACT GCTCGGCCTG AACGAAGGGC TGTCGCATCT CGCGAAATGC 
CTGATGCAGG CGGAGCTCGC CGGGCACCGC ACGATCGGCG TGCTGTACGG CCATACGGCC 
GCGGGTGCGT TCATCGCGAC CGCGCTCGCG ACGCGTACGC TGCTCGCGGT GCCGGGCGCC 
GAGCCGGAGG TGATGGACCT GCCGTCGATG TCGCGCGTGA CGAAGCTGCC GATCGACGTG 
CTGAAGGAGA TGGCGCGCGC GACGCCGGTG TTCGCGCCGG GGCTCGACAA TCTCGTGAAG 
ATGGGCGCCG TCGACGCCGT GCTCGATCCG GGCCGCGCGC TCGACGCGCA GGTCGGTGAA 
TGGCTCGGCA GGCCGGCCGA TCGCGGCGAC GGTCGTGCGG CGCGCGGCCG GCCGGTCGCG 
GCCGACGTCG CGCGACGCGT CGAGGCACTC GCGCGTGCCG CACGCTGA
 
Protein sequence
MTLDEVLTSL FPKGHSITRS GGLLTGHALL TGTRVDVIGV SERLPFGIDE ALTLASHVLD 
TIERGGDTPI LVLVDSDSQR MSKRDELLGL NEGLSHLAKC LMQAELAGHR TIGVLYGHTA 
AGAFIATALA TRTLLAVPGA EPEVMDLPSM SRVTKLPIDV LKEMARATPV FAPGLDNLVK 
MGAVDAVLDP GRALDAQVGE WLGRPADRGD GRAARGRPVA ADVARRVEAL ARAAR