Gene Bamb_1127 details

Gene Information

• Locus tag: Bamb_1127
• ID: 4308741
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: +
• Start bp: 1236395
• End bp: 1237024
• Gene Length: 630 bp
• Protein Length: 209 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 638148934
• Product: nucleoside-diphosphate-sugar epimerase-like protein
• Protein accession: YP_773019
• Protein GI: 115351180
• COG category: [G] Carbohydrate transport and metabolism; [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0702] Predicted nucleoside-diphosphate-sugar epimerases

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATTGC TGCTCGTCGG CGCGACCGGA CTCGTTGGGC GCCGCGTCCT CGACATCGCG 
CTGGCCGACG CGCGGGTGGA CCAGGTCGTC GTGCTCGCGC GCCGGCCGTT GTCGCCGCAT 
CCGAAGATGC GCGCATTGAC GGTCGACTTC GATCACCTGC CCGAGGCGGC CGACTGGTGG 
CAGGCCGACG CGGTGATCTG CACGCTCGGC ACCACGATGC GGGTCGCGGG CTCGCAGGCC 
GCATTCCGCC GCGTCGATCA CGACTATCCG CTCGCGGTCG CGCGTCTCGC GCACCGGTCC 
GGCACGTCGA CCTACGTGCT GAATTCCGCG CTCGGCGCGG ACCCGGCGTC GCGCATCTTC 
TACAACCGCG TGAAGGGCGA AGTCGAGCGT GCGCTCGCTG GCATCGGGTT CACGTCGCTC 
ACCTGCGTGC GGCCGGGCCT GATCGGCGGC AGCCGCGACG AGTTCCGGTT CGGCGAGCGG 
ATGATGGCGC TGGCGCTCGG TGCCGCCGGG CCGCTGTTGC CGCCGAAGTG GCGCGTGAAT 
CCCGCGCCGC GCATCGCCCG CGCGCTGCTC GATGCCGCGA TCGATGCACG CCCGGGCGTG 
CATGTCATCG GATCGGAACG GCTCGCGTGA 

 

Protein sequence

MKLLLVGATG LVGRRVLDIA LADARVDQVV VLARRPLSPH PKMRALTVDF DHLPEAADWW 
QADAVICTLG TTMRVAGSQA AFRRVDHDYP LAVARLAHRS GTSTYVLNSA LGADPASRIF 
YNRVKGEVER ALAGIGFTSL TCVRPGLIGG SRDEFRFGER MMALALGAAG PLLPPKWRVN 
PAPRIARALL DAAIDARPGV HVIGSERLA