Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_1125 |
Symbol | |
ID | 4309699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 1233396 |
End bp | 1234733 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638148932 |
Product | branched-chain alpha-keto acid dehydrogenase subunit E2 |
Protein accession | YP_773017 |
Protein GI | 115351178 |
COG category | [C] Energy production and conversion |
COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.31926 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGATTC ATGTGATCAA GATGCCGGAT ATCGGCGAAG GGATCGCCGA GGTCGAGCTG GTGGCGTGGC ACGTGGAAGT CGGCCAGACG ATCAAGGAAG ACCAGCCGCT CGCCGACGTG ATGACCGACA AGGCGGCGGT GGAGATTCCG TCGCCGGTGG CGGGCAAAGT GCTGGCGCTC GGCGGCCGGA TCGGCGAGAT GATGGCGGTC GGCAGCGAGC TGATTCGTGT CGAGGTCGAA GGCAACGGCA ACCTGAAGCC GGGCACGAAG GCACGCGATG CCGAAGCGGA TGCGACGTCG CGTCCGGCGG CGGTCGACAC GCCTGCAAAG TCGTCGAAAG TCACCGAAGC TGCCGAAGCG CACGACGCAT CGAAGGCAGC GCGCCACACC GCTGAGCGTG CACCGGCCGA GCCGCGTCGC ACGGAACACG CGGCGGCGCC GCGCGCGGCG CTCGCGCCGG GCGAACGGCC GCTCGCGTCG CCGGCGGTGC GCCAGCGCGC CTGGGACATG GGTATCGAGC TGCGCTATGT GCGCGGCACC GGCGAGGCCG GCCGGATCCT GCATGCGGAC CTCGATGCGT ACGCACGCAC GGGCGGCACG GCGGCGGGTG GCGCGCAAGC GCGCGGCTAC GACGAGCGCA ACGATGAAAC GGAGGTGCCG GTGATCGGCC TGCGGCGGGC GATCGCGCGC AAGATGCAGG AAGCGAAGCG CCGCATTCCG CACTTCAGCT ACGTCGAGGA GATCGACGTC ACCGAGCTCG AATCGCTGCG CAGCGAGCTG AACCGACGCC ACGGCGACAC GCGCGGCCGG CTCACGCCGC TGCCGCTGCT GATCCGCGCG ATGGTGATCG CGCTGCGCGA CTTCCCGCAG ATCAACGCGC GCTACGACGA CGAAGCCGGG GTCGTCACGC GCTACGGCGC GGTGCACATG GGCGTCGCGA CGCAGACGGA CAGCGGCCTC ACGGTGCCGG TGCTGCGTCA TGCGGAAGCG CGCGACGTGT GGTCGATCTC GGCGGAAATC GCGCGGCTCG CCGACGCCGT GCGCGCGAAC CGCGCGCAAC GCGACGAGCT GAGCGGCTCG ACGATCACGA TCTCGAGCCT CGGCGCGCTC GGCGGCATCA TGTCGACGCC GGTCATCAAC CATCCGGAGG TCGGCATCGT CGGCGTGAAC CGCATCGTCG AGCGGCCGAT GATCCGCGAC GGCGCGATCG TCGCGCGCAA GCTGATGAAC CTGTCGTCGT CGTTCGACCA TCGCGTCGTC GACGGCGCGG ACGCGGCCGA ATTCATCCAG GCCGTGCGCG GGTTGCTCGA GCGCCCGGCG CTGCTGTTCG TGGAGTGA
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Protein sequence | MGIHVIKMPD IGEGIAEVEL VAWHVEVGQT IKEDQPLADV MTDKAAVEIP SPVAGKVLAL GGRIGEMMAV GSELIRVEVE GNGNLKPGTK ARDAEADATS RPAAVDTPAK SSKVTEAAEA HDASKAARHT AERAPAEPRR TEHAAAPRAA LAPGERPLAS PAVRQRAWDM GIELRYVRGT GEAGRILHAD LDAYARTGGT AAGGAQARGY DERNDETEVP VIGLRRAIAR KMQEAKRRIP HFSYVEEIDV TELESLRSEL NRRHGDTRGR LTPLPLLIRA MVIALRDFPQ INARYDDEAG VVTRYGAVHM GVATQTDSGL TVPVLRHAEA RDVWSISAEI ARLADAVRAN RAQRDELSGS TITISSLGAL GGIMSTPVIN HPEVGIVGVN RIVERPMIRD GAIVARKLMN LSSSFDHRVV DGADAAEFIQ AVRGLLERPA LLFVE
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