Gene Bamb_1117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1117 
Symbol 
ID4309692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand- 
Start bp1225283 
End bp1226368 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content66% 
IMG OID638148925 
Productextracellular solute-binding protein 
Protein accessionYP_773010 
Protein GI115351171 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1840] ABC-type Fe3+ transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTGTGC CGCGCGAGCG CGCGGCGACA TACCCTTACC TCGCCCGGAG ACCCACCGTG 
TCCTTTCGCC TGACCTCGCT GCTGCGCGTG CTCGCCGCGC CCGTTGCCTG CGCCGCGCTC 
GTCGCGTTCG CGCCCGCCGC CCACGCCGAC GAATCCGCGA TCTGCTACAA CTGCCCGCCC 
GAATGGGCCG ACTGGGCCGC GCAAATCGCG GCGATCAAGC AGAAAACCGG TATCCGCGTG 
CCGTTCGACA ACAAGAACTC CGGTCAGGCG ATCGCGCAGC TGATCGCCGA ACAGAAGAGC 
CCGGTCGCCG ACGTCGTCTA TCTCGGCGTG TCGTCGGCGT TCCAAGCGAA GGACAAGGGC 
GTGATCGCGC CGTACAAGCC CGCGCACTGG AACGACATTC CCGCGAACCT GAAGGACCCG 
CAAGGCTACT GGTTCGCGAT CCACTCGGGC ACGCTCGGCT TCTTCGTGAA CAAGGACGCG 
CTCGACGGCA AGCCGGTGCC GCGTTCGTGG GCCGATCTGC TGAAGCCCGA ATACAAGGGC 
ATGGTCGGCT ACCTCGATCC GTCGAGTGCG TTCGTCGGTT ATGCGGGCGC GGTCGCCGTG 
AACCAGGCGC TCGGTGGCAG CCTCGACAAC TTCAAGCCGG CGCTCGACTG GTTCCGCAAG 
CTGAAGGCGA ACGCGCCGAT CGTGCCGAAG CAGACCGCGT ATGCGCGCGT GCTGTCCGGC 
GAGATTCCGA TCCTGCTCGA CTACGACTTC GACGCGTATC GCGCGAAGTA CAAGGATCAC 
GCGAACGTCG AGTTCGTGAT TCCGCAGGAA GGCACGATCG CGGTGCCGTA CGTGATGAGC 
CTCGTGAAGG GCGCGCCGCA CGACGCGAAC GGCAAGAAGG TGCTCGACTT CGTGCTCTCC 
GACGAAGGCC AGAAACTGTG GGCCAACGCG TATCTGCGTC CGGTGCGCGC GCAGACGCTC 
GGCGCCGACG TCGCCGCGAA GTTCCTGCCG GCAAGCGAAT ACGCGCGCGC GAAACCGGTC 
GACTTCGGCA AGATGGCGGC CGGCCAGCAA GCGTTCGGCC TGCAATACCT GCAGATGATG 
CAGTAA
 
Protein sequence
MRVPRERAAT YPYLARRPTV SFRLTSLLRV LAAPVACAAL VAFAPAAHAD ESAICYNCPP 
EWADWAAQIA AIKQKTGIRV PFDNKNSGQA IAQLIAEQKS PVADVVYLGV SSAFQAKDKG 
VIAPYKPAHW NDIPANLKDP QGYWFAIHSG TLGFFVNKDA LDGKPVPRSW ADLLKPEYKG 
MVGYLDPSSA FVGYAGAVAV NQALGGSLDN FKPALDWFRK LKANAPIVPK QTAYARVLSG 
EIPILLDYDF DAYRAKYKDH ANVEFVIPQE GTIAVPYVMS LVKGAPHDAN GKKVLDFVLS 
DEGQKLWANA YLRPVRAQTL GADVAAKFLP ASEYARAKPV DFGKMAAGQQ AFGLQYLQMM 
Q