Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_1093 |
Symbol | |
ID | 4309668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 1193893 |
End bp | 1194936 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638148901 |
Product | extracellular solute-binding protein |
Protein accession | YP_772986 |
Protein GI | 115351147 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.762259 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGAATC CGCGCACCCG CCTGCTGCCG CTCGCCGGCG CCCTTGCCGT TGCCGCCGCC GCGTTCGCGC CGCTGGCCCA CGCCGCCGAG GAAGTCAGCC TGTACACCAC CCGCGAACCG AAGCTGATCC AGCCGCTGAT CGACGCGTTC ACGCAGCAGA GCGGCGTCAA GGTCAACACG GTATTCGTGA AGGACGGCCT GCTCGAGCGC GTGAAGGCGG AAGGCGCGCA GTCGCCGGCC GACGTGCTGA TGACGGTCGA CATCGGCAAC CTGCTCGACC TCGTCGACGG CGGGCTCGCG CAGCCGGTGC GCTCGAAGGT GCTCGACGAC GCGATTCCCG CGAATCTGCG CGGCGCGCAG GGCGACTGGT ACGCGCTGTC GCTGCGCGAT CGTGTGCTGT ATGTGGAGAA GGACCTGAAG GTCGACGCGT TCCGCTACGA GGATCTCGCC GATCCGAAAT GGAAGGGCAA GGTCTGCATC CGCTCGGGGC AGCATCCGTA CAACACGGCG CTCGTCGCGG CGATGATCGC GCACGACGGC GAAGCCGCGA CCGAAAAATG GCTGCGCGGC GTGAAGGCGA ACCTCGCGCG CAAGGCGACG GGCGGCGACC GCGACGTCGC GCGCGACATT CTCGGCGGGA TCTGCGACGT CGGTCTCGCC AACGCGTACT ACGTCGGTCA CATGAAGAAC GCGGAGCCGG GCACCGATGC GCGCAAGTGG GGCGACGCGA TCAAGGTCGT GCGGCCGACG TTCGCGAACG CGAAGAGCGG CGGCACGCAC GTCAACATCA GCGGCGCGAC GGTCGCGAAG CACGCGCCGC ACAAGGCCAA CGCGGTGAAG CTGCTCGAGT ACCTCGTGTC GCCGCAAGCG CAGGCGCTCT ATGCGCAGGC GAACTACGAA TACCCGGTGC GCGCGAACGT GAAGCTCGAT CCGGTGATCG CGAGCTTCGG CACGCTGAAG ATCGACCCGC TGCCGCTGAC CGACATCGCG AAGCATCGCA AGGCGGCCAG CCAGCTCGTC GACAAGGTCG GCTTTGACAA CTGA
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Protein sequence | MSNPRTRLLP LAGALAVAAA AFAPLAHAAE EVSLYTTREP KLIQPLIDAF TQQSGVKVNT VFVKDGLLER VKAEGAQSPA DVLMTVDIGN LLDLVDGGLA QPVRSKVLDD AIPANLRGAQ GDWYALSLRD RVLYVEKDLK VDAFRYEDLA DPKWKGKVCI RSGQHPYNTA LVAAMIAHDG EAATEKWLRG VKANLARKAT GGDRDVARDI LGGICDVGLA NAYYVGHMKN AEPGTDARKW GDAIKVVRPT FANAKSGGTH VNISGATVAK HAPHKANAVK LLEYLVSPQA QALYAQANYE YPVRANVKLD PVIASFGTLK IDPLPLTDIA KHRKAASQLV DKVGFDN
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