Gene Bamb_1090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1090 
Symbol 
ID4309665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp1190932 
End bp1191402 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content65% 
IMG OID638148898 
ProductAsnC family transcriptional regulator 
Protein accessionYP_772983 
Protein GI115351144 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.540988 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGCCA TCGATCGCAA GCTGCTGGAG CTGTTGCAGG CAGATGCCAC ATTGCCGATC 
GCGGAACTCG CGCAGCGCGT GAACCTGTCG CAGACGCCCT GCTGGAAGCG CGTGCAGCGG
CTCAAGGAAA CCGGCGCGAT CCGCGCGCAG GTCGCGCTGT GCGATCCACG CAAGCTCGGG
GTCGGCACGA CCGTGTTCGT CGCGATTCGA ACGAACCAGC ACACCGAGGA GTGGGCGCAG
CGTTTCACGC AGGCCGTGCG CGACATGCCG GAAGTCGTCG AGGTGTACCG GATGAGCGGC
GAGACCGACT ATCTGCTGCG GGTCGTGGTG GCCGGCATCG ACGATTACGA TCGCGTGTAC
AAGCAGCTGA TCCGCGCGGT GCCGCTGTTC GACGTGAGCT CGTCGTTCGC GATGGAGCAG
ATCAAGTATT CGACCGCGCT GCCGGTGCGC GATCTGTCCG AGCCGGCGTA G
 
Protein sequence
MDAIDRKLLE LLQADATLPI AELAQRVNLS QTPCWKRVQR LKETGAIRAQ VALCDPRKLG 
VGTTVFVAIR TNQHTEEWAQ RFTQAVRDMP EVVEVYRMSG ETDYLLRVVV AGIDDYDRVY
KQLIRAVPLF DVSSSFAMEQ IKYSTALPVR DLSEPA