Gene Bamb_1088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1088 
Symbol 
ID4311147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand+ 
Start bp1189383 
End bp1189838 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content68% 
IMG OID638148896 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_772981 
Protein GI115351142 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACCA GCAGCCGGTT CGCGTTTGCC GTTCACGTGC TTGCCTTGCT GTCGATGCAG 
GAAGGCGCGC CGCTGTCGTC CGACATCATC GCGGGCAGCG TGAACACGAA TCCGGCGCTG 
ATTCGCCGTC TGCTGTCGAT GCTGGCGGCT GCCGGGCTGA CCACGTCGCA ACTCGGCGCG 
GGCGGCGGCG CGCTGCTGGC GCGCGAGCCG GGCAAGATCA CGCTGCTTGA CGTGTATCGT 
GCGGTCGACG ATGCGCAGTT GTTCGCACTG CATCGCGAGG CGCCGAATCC CGCGTGTCTC 
GTCGGGCGGC ACATCCAGGG CGTGCTGATC GACTACATCG GCGACGCGCA GCGCGCGATG 
GAAGCATCGC TTGCCACGCG CACCCTCGCG GACGTCACGG CCGACGTGCT CGAATCGGAG 
CATCGCAGTC GGCCCGCGGG AAGCGCCGGC GGCTAA
 
Protein sequence
MNTSSRFAFA VHVLALLSMQ EGAPLSSDII AGSVNTNPAL IRRLLSMLAA AGLTTSQLGA 
GGGALLAREP GKITLLDVYR AVDDAQLFAL HREAPNPACL VGRHIQGVLI DYIGDAQRAM 
EASLATRTLA DVTADVLESE HRSRPAGSAG G