Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_1085 |
Symbol | |
ID | 4311144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 1186884 |
End bp | 1188077 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638148893 |
Product | Rh family protein/ammonium transporter |
Protein accession | YP_772978 |
Protein GI | 115351139 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0004] Ammonia permease |
TIGRFAM ID | [TIGR00836] ammonium transporter |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATGGTC TGAAATCCGG CGTCGATACA TTGTTCCTGT TGATCGGCGC CGTCATGGTG CTCGCGATGC ACGCGGGCTT TGCATTCCTC GAGCTCGGCA CGGTCCGCAA GAAGAACCAG GTCAACGCGC TCGTGAAGAT CCTGGTCGAC TTCTCGGTGT CGACGCTCGC GTACTTCTTC ATCGGCTACA CGATCGCGTA CGGCGTCGAG TTCTTCGACG ACATCGGCAC GCTGTCGCAG CACAACGGCT ACGTGCTCGT GCGCTTCTTC TTCCTGCTGA CGTTCGCGGC GGCCATCCCC GCGATCGTGT CCGGCGGCAT CGCGGAGCGC GCGAAATTCA ATCCGCAGCT CGTCGCGACG CTGATCATCG TCGGCTTCAT CTACCCGTTC TTCGAAGGGA TCGCATGGAA CGACCGCTTC GGCGTGCAGG ACTGGCTCAC GCATGCGTTC GGCGCGCCGT TCCACGATTT CGCGGGCTCG GTCGTCGTGC ACGGATTCGG CGGCTGGGTC GCGCTGCCGG CCGTGCTGCT GCTCGGCGCA CGCCACGGCC GCTATGCGAA GGACGGCCGG ATCGCCGCGC ATCCGCCGTC GAACATTCCG TTCCTCGCGC TCGGCGCGTG GGTGCTCGCG GTCGGCTGGT TCGGCTTCAA CGTGATGAGC GCGCAGACGC TCGACAAGAT CAGCGGCCTC GTCGCCGTGA ACTCGCTGAT GGCGATGGTC GGCGGCACGC TCGCCGCGTG GATGGCCGGC CGCAACGATC CGGGCTTCAC GTACAACGGC CCGCTCGCGG GCCTCGTCGC GGTCTGCGCG GGCTCCGACG TGATGCACCC GATCGGTGCG CTCGTCACGG GTGCCGCGGC AGGCGCGATA TTCGTCGCGA TGTTCACCTG CGTGCAGAAC AAGTGGCGCA TCGACGACGT GCTCGGCGTA TGGCCGCTGC ACGGGCTGTG CGGCGCGCTC GGCGGCGTCG CGGCCGGGGT GTTCGGCCAG CCCGTGTTCG GTGGCCTCGG CGGCGTGTCG TTCGTGTCGC AGCTCATCGG CACGCTCGGC GGCATCGCGA TCGCCACCGC GGGCGGCACG CTCGTGTATG GCGCGCTGAA GGCGACGGTC GGGCTGCGCC TCGATCGCGA AGCCGAATTC GACGGCGCCG ACCTGTCGAT CCACCGCATC TCGGCGACGC CCGAGCGCGA TTGA
|
Protein sequence | MDGLKSGVDT LFLLIGAVMV LAMHAGFAFL ELGTVRKKNQ VNALVKILVD FSVSTLAYFF IGYTIAYGVE FFDDIGTLSQ HNGYVLVRFF FLLTFAAAIP AIVSGGIAER AKFNPQLVAT LIIVGFIYPF FEGIAWNDRF GVQDWLTHAF GAPFHDFAGS VVVHGFGGWV ALPAVLLLGA RHGRYAKDGR IAAHPPSNIP FLALGAWVLA VGWFGFNVMS AQTLDKISGL VAVNSLMAMV GGTLAAWMAG RNDPGFTYNG PLAGLVAVCA GSDVMHPIGA LVTGAAAGAI FVAMFTCVQN KWRIDDVLGV WPLHGLCGAL GGVAAGVFGQ PVFGGLGGVS FVSQLIGTLG GIAIATAGGT LVYGALKATV GLRLDREAEF DGADLSIHRI SATPERD
|
| |