Gene Bamb_1083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1083 
Symbol 
ID4311142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp1183539 
End bp1184414 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content63% 
IMG OID638148891 
Productalpha/beta hydrolase fold 
Protein accessionYP_772976 
Protein GI115351137 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCACCA CCACGCCTTC GATCGTTCAC CACACCGTCA CTGCGAACGG AATTCGACAA 
CATTTCATCG ACGCGGGCAG CGGGCCTGTC GTGGTCCTGC TGCACGGTTT CCCGGAAACC
AGCTTCGCAT GGCGCTTCCA GATTCCCGTC CTGGCACAAC GCTACCGCGT CATCGTGCCC
GACCTGCGCG GCTACGGCGA AACCGACAAG CCGGCCGCCG GGTACGACAA ACGCAACATG
GCCCGCGATC TCGTCGCATT GCTCGACACG CTTGGCATCG GCCGAATCGC GCTGGTCGGG
CACGATCGCG GCGCACGCGT CGCGACACGC TTCGCGAAGG ACTTCCCCGA GCGCCTCGAG
CGCCTTGTCG TGATGGACAA CGTGCCGACC CGCATCGTCG CGCAGAACAT GACAGCCCAG
ACGGCACGCG CGTACTGGTT CTTCCTGTTT CATCAGGTAG CGGACCTGCC CGAAGCACTG
ATCGCCGGCA AGGAAGCCGA GTGGCTCAGC TACTTCTTCT CCGACTGGTG CTACAACCCG
CACGCCATTT CCGGCGAGGC GTTCGACACG TATGTCCGGG CCTATCGTCG TCCCGGCGCC
GTCCGTGGCG CACTCGCCGA CTACCGCGCG AACGCGGAAG ACGTCCAACA GGATCTCGCC
GACGCCGATG TGAAGATCGC ATGCCCGACC ATGGCGATCT GGGGTGAGGA TTTCTACGCG
GTCGGCAAGA TGTTCGACAT GAAATCCGTC TGGGAAAGCA TGGCGACACA TCTTCGGGCC
GAGCCCATCG CGCAATGCGG CCACCTTCCG CAGGAAGAAC AGCCGGAACG CGTCAACGCG
CTGCTGCTCG ATTTCCTGAA GAGCTGGGAA GGTTGA
 
Protein sequence
MSTTTPSIVH HTVTANGIRQ HFIDAGSGPV VVLLHGFPET SFAWRFQIPV LAQRYRVIVP 
DLRGYGETDK PAAGYDKRNM ARDLVALLDT LGIGRIALVG HDRGARVATR FAKDFPERLE
RLVVMDNVPT RIVAQNMTAQ TARAYWFFLF HQVADLPEAL IAGKEAEWLS YFFSDWCYNP
HAISGEAFDT YVRAYRRPGA VRGALADYRA NAEDVQQDLA DADVKIACPT MAIWGEDFYA
VGKMFDMKSV WESMATHLRA EPIAQCGHLP QEEQPERVNA LLLDFLKSWE G