| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1080 |
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| Symbol | |
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| ID | 4311139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 1179340 |
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| End bp | 1180731 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638148888 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_772973 |
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| Protein GI | 115351134 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.21193 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAACC AACAAAAGCC CACGCCCCCT TCGAAGGATC CCGCCTCCCC TGCCGCCCGT
CGCCCGCGCC GCACGCTGGT GATCGGGACG CTCGCAGTCG TCATCGGCGG CCTGCTGTGG
TGGCACCCGT GGAGCCGCAC GCCGGCCGGC ACGCAGGCCG CAGGCAGCGC GGCGTCCGGC
GCGAGCGCCG GCGGCGGCCA TCGCGGCCGC GGCGGCCCCG CCGCGATGGC GAACATTCCG
CAGCCCGTGT CGGTCGCGAC CGCGACGCAA GGCGAGATGC CGATCGTGCT GTCCGCGCTC
GGCACCGTGA CGCCGCTCGC GAACGTGACG GTCAAGACGC AGCTGTCGGG CTATCTGCAG
TCGGTCGCCT TCCAGGAAGG CCAGCTCGTC AAGAAGGGCG ACCTGCTCGC GCAGATCGAC
CCGCGTCCGT ACCAGGTCGC GCTCGAAACC GCCGAAGGCA CCTACGCCCG CGACGCGGCC
CTGCTCGCGA CGGCCCGCCT CGACCTGAAG CGCTACCAGA CACTGCTGTC GCAGGACTCG
ATCGCGTCGC AGACGGTCGA CACGCAGGCG TCGCTCGTCA AGCAATACGA AGGAACGGTG
AAGACCGACC AGGCGGCGAT CGATTCCGCG AAGCTGAACC TCACGTACGC ACGCATCACG
GCGCCGGTGT CGGGCCGCGT CGGCCTGCGC CAGGTCGATC CCGGCAACTA CGTGACGGCG
GGCGACACGA ACGGGATCGT CGTGATCACG CAGATGCAGC CGATGAGCGT GATCTTCACG
ACGTCGGAAG ACAACCTGTC GCAGATCCTC AAGCAGGTGA ACGCGGGCAA GAAGCTGTCG
GTCACCGCGT ACAACCGCAA CAACACGGTG CCGCTCGAGA CGGGCTCGCT CGAAACGCTC
GACAACCAGA TCGACACGAG CACCGGCACG GTCAAGCTGC GCGCGACGTT CGATAACAAG
GAAGGCCTGC TGTTCCCGAA TCAGTTCGTG AACACGCGCC TGCTCGTCGA CGTGCTGCGC
AATGCGACGA TCGTGCCGAC GGCCGCCGTG CTCACGGGCT CGATCGGCCA GTTCGTGTAC
ATCGTCAAAC CCGACAACAC GGTGACGGTG CGCAAGGTCA CGATCGGCCC GGTCGACGGC
GAACGCACCA GCATCGTCAG CGGCGTCGCG CTCGGCGAGC GCGTGGTCAC CGACGGCTCC
GACCGCTTGC GCGAAGGCGC GAAGATCACG ATCCCGGCCG ACAAGCCCAA AGGCGCGTCG
GGCGCGCACC GCGCCGGCGC GGCGTCCGGT GCATCGGGTG CATCGGGTGC TTCGGGCGCA
TCGGGTGCGG CCGGCCACCG CGGCGGACAC AAGCACGGCG CGTCGCAGGC CGCGGCCCCC
GCGGCCCAGT AA
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| Protein sequence | MDNQQKPTPP SKDPASPAAR RPRRTLVIGT LAVVIGGLLW WHPWSRTPAG TQAAGSAASG
ASAGGGHRGR GGPAAMANIP QPVSVATATQ GEMPIVLSAL GTVTPLANVT VKTQLSGYLQ
SVAFQEGQLV KKGDLLAQID PRPYQVALET AEGTYARDAA LLATARLDLK RYQTLLSQDS
IASQTVDTQA SLVKQYEGTV KTDQAAIDSA KLNLTYARIT APVSGRVGLR QVDPGNYVTA
GDTNGIVVIT QMQPMSVIFT TSEDNLSQIL KQVNAGKKLS VTAYNRNNTV PLETGSLETL
DNQIDTSTGT VKLRATFDNK EGLLFPNQFV NTRLLVDVLR NATIVPTAAV LTGSIGQFVY
IVKPDNTVTV RKVTIGPVDG ERTSIVSGVA LGERVVTDGS DRLREGAKIT IPADKPKGAS
GAHRAGAASG ASGASGASGA SGAAGHRGGH KHGASQAAAP AAQ
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