| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1076 |
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| Symbol | |
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| ID | 4311135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 1170662 |
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| End bp | 1171750 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638148884 |
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| Product | outer membrane protein (porin) |
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| Protein accession | YP_772969 |
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| Protein GI | 115351130 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.441264 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACCT TCCGCACGGC CGCGACGGCC GTTTCGTTCG CGGCCGCCGC CGCGTCGCCG
GGCGCGCACG CGCAGAGCAG CGTGACGCTG TACGGCATCG TCGACACGGG AATTCAGTAC
TACAACAACG CGGCGGGGGG CGGCGCAGTC GCCGGCATGC CGTCGCTGAC CGGTGAAGTG
CCGTCGCGCT TCGGGTTGCG CGGCGTCGAG GATCTCGGCG GCGGCTATCG CGCGTTCTTC
GTGCTCGAGA ACGGCTTCGC GCCGAACTCG GGGACGCTGA ACTACGGCGG GCGCCTGTTC
GGCAGGCAGG CGAACGTCGG CATCGAGTCG CCGTACGGCG CGCTCACGCT GGGGCGGCAG
ATGAACATGT CGATGCGGGT GCTGCTCAAC GCCGACGTGA TCGGTCCGTC GATCCATTCG
ATGGCGAGCT TCGACAGCTA CCTGCCGAAC GCGCGCAGCG ACAACGCGCT CGGATATCTC
GGCCGCTTCG GCGGCGTGAC GCTCGGCGGC ACCTACAGCA CCGGGCGCGA CGACGCGGGC
CCGGCCGGCC CGTCGGCGAC CCATTGCGCG GGCAACGTGG CGGGCGACCC GGTCGCCTGT
CGCCAGTACA CGATGATGGT GGCGTACGAC GCGCCGCAGT TCGGCGCGGC CGCCTCGTAT
GACGTGATGC ACGGCGGCGC GGGCGCGTCG GCGCCGCTGT CGAGCCCCGG CTATACGGAC
ACGCGCACGA TCGTCGACGC GTACGTGAAA TTCGGCATCG CGAAACTCGG CGCGGGCTGG
ATCCGCCGCA ACACGGCGGC CGCGGCGCAC AGCCAGTCGG ACATCTTCTT CGCGGGCGGC
ACGGTCCAGG CAACGCCGGC GCTATCATTC GACGCACAGG CGCTGCGCTA CCTGCTGCGC
GGCCGCTTCG ACTCGAACCT GTTCGTCGCG CGGGCGAACT ACAGCCTGTC GAAGCGTACG
ATGGTCTATA CGTCCGTCGC CTACATGACG AACAGCGCAC TCGGCACGTC GGCGGTGGCG
GCCGGCGGCA CCGTCGGCGC CGGCCAGAAC CAGGTCGGCG TGATGGCGGG CATCCAGCAG
CGCTTCTGA
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| Protein sequence | MKTFRTAATA VSFAAAAASP GAHAQSSVTL YGIVDTGIQY YNNAAGGGAV AGMPSLTGEV
PSRFGLRGVE DLGGGYRAFF VLENGFAPNS GTLNYGGRLF GRQANVGIES PYGALTLGRQ
MNMSMRVLLN ADVIGPSIHS MASFDSYLPN ARSDNALGYL GRFGGVTLGG TYSTGRDDAG
PAGPSATHCA GNVAGDPVAC RQYTMMVAYD APQFGAAASY DVMHGGAGAS APLSSPGYTD
TRTIVDAYVK FGIAKLGAGW IRRNTAAAAH SQSDIFFAGG TVQATPALSF DAQALRYLLR
GRFDSNLFVA RANYSLSKRT MVYTSVAYMT NSALGTSAVA AGGTVGAGQN QVGVMAGIQQ
RF
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