| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1068 |
|---|
| Symbol | |
|---|
| ID | 4311249 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | - |
|---|
| Start bp | 1160452 |
|---|
| End bp | 1161975 |
|---|
| Gene Length | 1524 bp |
|---|
| Protein Length | 507 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638148876 |
|---|
| Product | putative signal transduction protein |
|---|
| Protein accession | YP_772961 |
|---|
| Protein GI | 115351122 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1639] Predicted signal transduction protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAATCA CCGCACACCT GCCCCGCACG GCGCTGCTCG ACAAGCTGTG GGCCCGGATG
AACGAACGGG GCGACTTCCC GCTGCTGTCG GAATCGCTGC GCGCGACGAT GGCCGCGATG
AAGAACGACG ACCTCGACTT CACCGCGCTC GTACGCGTCG TACTGTCGGA TTTCGCGCTC
ACGCAGAAAG TCCTGCGGCT CGCCAATTCC GCGATGTACA TGGCGTTCGG CGGCAACATC
ACGACCGTCA CGCGAGCCCT GATGGTGCTC GGCATGGACA CGGTCGGCCA TCTCGTCGTC
GGGCTGAAGC TCGTCGACCA TTTCCACCAC AGCACGCCGC GCCGCATCGA CGCGAAGCTC
GAGCTGAACC GCGCGCTGCT GTCCGGCTGC GTCGCCCGCA AGCTGACCGA GCACGCGGAA
CTGCGCGGTG GCGAGGAAGC CGTGGTCTGC ACGCTGATGC GCCAGGTCGG CAAGCTGCTC
GTGGTCTGCT ATCTCGACAG CGAATGGGAC CGGATTCGCC GCCGCGCCGC CGAGCTGAAC
GGCGATGACG CGGCCGCGTG CATCGACGTG CTCGGCGTCG GCTTCGACGA AATCGGTCTG
GAAGCCGCCG CGAGCTGGCG CTTGCCCGAC GTGATCCGCG CCGGGATGGC CGACGGCGAC
GGTCGCGCCG CGCACGCCGC CCACCGCGAC GAACGCGACG AAGACGACGA AGACGAGCGC
GCCGACCGCC GGCGCCCCGC GGCCTGTGCC GACGAAGGCA CCGACCGCGT GCGCTGGCTG
CGCGCGGTGA GCCGCTGCTC GACCGACGTC GCCGGGGCGC TCGCGATGCC CGCGGGCCCG
CAGCGCGACG CGCACATCGC GGTGCTCGCG CAGCGCTACG GGCAGGAACT GGAGATCGAT
GCCGACGCGT TGGTGGAGAT CGCCGACCGG CTCGCACGCG AGGAAGCGAG CGACACCGTG
ATGCGCGAGA TCGTCGAGCT GCGCGCGAAC GCCGATGCGA TCGCGCGGGC GCAGCCCGAA
CCCGAGGCAT GCCTCGAGGC CGGCCTCGCG GACCTGCGCG CGCTGCCGTC CGAGCACGTG
CTGATGCCGG TGCTCGCGCT CGCGTCGGAA AGCCTGCTCG CGGGGCTCGC GTTCACGCGC
ACCGTGATGT TCGTGCGCCG CGACGACGGC ATGTTCGCCG CGCGCCTCGG CTTCGGGCCG
GACGTCGATG CGGCGCTCGA CCGGCTGTGC TTCGACGAGC GCTTCGAGCC GGACGTGTTC
CATCTCGCGA TCACGAACTC GGTCGGCATC TTCATCGAGC AGGCGCAGGA GCCGAAGATG
GTGAAGCGCC TGCCCGCGTG GTACCTCGAT GCGCTCCCCG ACACGCGCGC GTTCGTGCTG
CTGCCGGTGC GCGTCGGCAC GACGACCGTC GGCCTGCTGT ACGGCGACTG GGCCGGCGCG
CAGCCCGCGC GCAAGATCAC GCAGCAGGAG ATGAGCGTGC TCAACGAGCT CGCGCGCGAA
CTGGGGCGAT TCTTCCCCGC GTGA
|
|---|
| Protein sequence | MSITAHLPRT ALLDKLWARM NERGDFPLLS ESLRATMAAM KNDDLDFTAL VRVVLSDFAL
TQKVLRLANS AMYMAFGGNI TTVTRALMVL GMDTVGHLVV GLKLVDHFHH STPRRIDAKL
ELNRALLSGC VARKLTEHAE LRGGEEAVVC TLMRQVGKLL VVCYLDSEWD RIRRRAAELN
GDDAAACIDV LGVGFDEIGL EAAASWRLPD VIRAGMADGD GRAAHAAHRD ERDEDDEDER
ADRRRPAACA DEGTDRVRWL RAVSRCSTDV AGALAMPAGP QRDAHIAVLA QRYGQELEID
ADALVEIADR LAREEASDTV MREIVELRAN ADAIARAQPE PEACLEAGLA DLRALPSEHV
LMPVLALASE SLLAGLAFTR TVMFVRRDDG MFAARLGFGP DVDAALDRLC FDERFEPDVF
HLAITNSVGI FIEQAQEPKM VKRLPAWYLD ALPDTRAFVL LPVRVGTTTV GLLYGDWAGA
QPARKITQQE MSVLNELARE LGRFFPA
|
|---|
| |