Gene Bamb_1065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1065 
Symbol 
ID4311246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp1156791 
End bp1158131 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content69% 
IMG OID638148873 
Productsuccinylarginine dihydrolase 
Protein accessionYP_772958 
Protein GI115351119 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3724] Succinylarginine dihydrolase 
TIGRFAM ID[TIGR03241] succinylarginine dihydrolase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCAC AAGAAGCCAA TTTCGACGGA CTCGTCGGCC CGACCCACAA CTACGCCGGG 
CTGTCGTTCG GCAACGTGGC GTCGCTCAAC AACGAGAAGT CGGCCGCGAA CCCGAAGGCG
GCCGCGAAGC AGGGGCTGCG CAAGATGAAG CAGCTCGCGG ATCTCGGCTT CGCGCAAGGC
GTGCTGCCGC CGCAGGAGCG GCCGTCGCTG CGCCTGCTGC GCGAGCTCGG CTTCTCCGGC
AAGGACGCGG ACGTGATCGC GAAGGCCGCG AAGCAGGCGC CCGAACTGCT CGCCGCGGCG
AGCTCGGCAT CGGCGATGTG GACCGCGAAC GCGGCGACCG TCAGCCCGTC GGCTGACACC
GGCGACGGCC GTGTGCACTT CACGCCGGCC AACCTGTGCA GCAAGCTGCA TCGCGCGATC
GAGCACGACG CGACGCGCCG CACGCTGTCG ACGCTGTTCG CCGATCCCGC GCATTTCGCG
GTGCACGAGG CGCTGACGGG CACGCCGGCG CTCGGCGACG AAGGGGCCGC GAACCATACG
CGCTTTTGCG CCGAATACGG CAAGCCGGGC GTCGAGTTCT TCGTGTACGG CCGTGCGGAA
TACCGCCGCG GCCCGGAGCC GAAGCGCTTC CCGGCGCGCC AGACCTTCGA GGCGAGCCGC
GCGGTCGCGC AGCGCCACGG CCTCGACGAA ACGGCGACGG TCTATGCGCA GCAGGATCCG
GACGTGATCG ATGCGGGCGT GTTCCACAAC GACGTGATCT CGGTCGGCAA CCGCGACACG
CTGTTCACGC ACGAGCGCGC GTTCGTCAAC AAGCAGGCGA TCTACGACAC GCTGACGGCC
ACGCTCGACG CGCGCGGCGC GCGGCTGAAC GTGATCGAAG TGCCGGATGC TGCCGTGAGC
GTGAACGACG CGGTCACGTC GTACCTGTTC AACAGCCAGC TGCTGTCGCG CGCCGACGGC
TCGCAGGTGC TCGTCGTGCC GCAGGAGTGT CGCGAGAACG CGAAGGTCGC GGCCTATCTC
GACGAACTCG CGGCCGGCAA CGGCCCGATC CGCGACGTGC TCGTGTTCGA CCTGCGCGAA
AGCATGAAGA ACGGCGGCGG GCCTGCGTGC CTGCGCCTGC GCGTCGTGCT GAACGACGCC
GAGCGGGCGG CCGTCACGTC GAACGTGTGG ATGAACGACA CGCTGTTCGC GTCGCTCGAC
GCGTGGATCG AAAAGCACTA TCGCGACCGT CTCGCCCCGG AAGATCTCGC CGATCCGACG
CTGCTCGACG AATCGCGCAC GGCGCTCGAC GAGCTCACGC AGATCCTGCG TGTCGGGTCG
CTGTATGACT TCCAGCGCTG A
 
Protein sequence
MNAQEANFDG LVGPTHNYAG LSFGNVASLN NEKSAANPKA AAKQGLRKMK QLADLGFAQG 
VLPPQERPSL RLLRELGFSG KDADVIAKAA KQAPELLAAA SSASAMWTAN AATVSPSADT
GDGRVHFTPA NLCSKLHRAI EHDATRRTLS TLFADPAHFA VHEALTGTPA LGDEGAANHT
RFCAEYGKPG VEFFVYGRAE YRRGPEPKRF PARQTFEASR AVAQRHGLDE TATVYAQQDP
DVIDAGVFHN DVISVGNRDT LFTHERAFVN KQAIYDTLTA TLDARGARLN VIEVPDAAVS
VNDAVTSYLF NSQLLSRADG SQVLVVPQEC RENAKVAAYL DELAAGNGPI RDVLVFDLRE
SMKNGGGPAC LRLRVVLNDA ERAAVTSNVW MNDTLFASLD AWIEKHYRDR LAPEDLADPT
LLDESRTALD ELTQILRVGS LYDFQR