Gene Bamb_1051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1051 
Symbol 
ID4308648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp1143326 
End bp1144210 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content73% 
IMG OID638148859 
ProductYdjC family protein 
Protein accessionYP_772944 
Protein GI115351105 
COG category[S] Function unknown 
COG ID[COG3394] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03473] hopanoid biosynthesis associated protein HpnK 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.408827 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGACGC AGCGGGCGGC GCGGGCGCTG ATCTTCACCG CGGACGACTT CGGGCTGCAT 
CCGCGCGTCA ACGCGGCGGT CGAGCGCGCG CATCGCGACG GCGTGCTGAA CGCCGCGAGC
CTGATGGTCG GTGCGCCCGC GGCGCACGAT GCGATCGAAC GCGCGCGGCG GCTGCCGTCG
CTCGCGGTCG GCCTGCATCT CGTCCTCGCG GACGGGCCGG CCATGCTGCC CGCGCATGAG
ATCCCCGCGC TCGTCGGCCC CGACGGGCGG TTCGGCGACG CGATGGCGAA GGACGGCTGC
CGATTCTTCT TCCTGCCGCA CGTGCGTGCG CAACTGCGCC GCGAGATCCG CGCGCAGTTC
GACGCGTTCG CGGCGAGCGG CCTGCCGCTC GATCACGTGA ACGCGCACAA GCATTTCCAC
CTGCATCCGA CCGTGCTGTC GCTGATCATC GAGATCGGCC GCGACTACGG GCTGCGCGCG
GTGCGGCTGC CGTATGAAAC GAGCGCGCCC GCGCTGCTCA AGCCGTGGAT CGCGCTCGTG
CGCGCCCGGC TCGATCGCGC GGGGCTCGCG CACAACGACT ACGTGGTCGG GATCGCGCAT
ACGGGCGCGA TGGACGAGGG CGTGCTGCTC GACGCGCTCG CGGCGCTGCC GCCCGGTGTC
GGCGAGATCT ACTGTCATCC GGCCGAGGCC GGCGACGGCC CGATCACCCC GACGATGGCC
GATTACCGCC CGGTCGACGA ACTCGACGCG CTGCTGTCGC CGCGCGTCGC AGCCGCGCTG
AAGGCGGCCG GTGTCGCGAC CGGCGGGTTT GCGGACGTGT TCGGCCAGCT TGCCGGGCGC
AGCGGCACGC GTGCGTCGCG CGAAGCGGGG GCACACTCGT CATGA
 
Protein sequence
MTTQRAARAL IFTADDFGLH PRVNAAVERA HRDGVLNAAS LMVGAPAAHD AIERARRLPS 
LAVGLHLVLA DGPAMLPAHE IPALVGPDGR FGDAMAKDGC RFFFLPHVRA QLRREIRAQF
DAFAASGLPL DHVNAHKHFH LHPTVLSLII EIGRDYGLRA VRLPYETSAP ALLKPWIALV
RARLDRAGLA HNDYVVGIAH TGAMDEGVLL DALAALPPGV GEIYCHPAEA GDGPITPTMA
DYRPVDELDA LLSPRVAAAL KAAGVATGGF ADVFGQLAGR SGTRASREAG AHSS