| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1050 |
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| Symbol | |
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| ID | 4308647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 1141901 |
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| End bp | 1143322 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638148858 |
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| Product | radical SAM domain-containing protein |
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| Protein accession | YP_772943 |
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| Protein GI | 115351104 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1032] Fe-S oxidoreductase |
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| TIGRFAM ID | [TIGR03471] hopanoid biosynthesis associated radical SAM protein HpnJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0795903 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACGC TGTTCTTGCA GGCCCCTTCG TATGACGGCT TCGACGGCGG AGCCGGCTCG
CGCTATCAGG CGAAGCGCGA AATCCGTTCC TTCTGGTACC CGACGTGGCT CGCGCAGCCG
GCCGCGCTCG TGCCGGGCAG CCGTGTCGTC GACGCACCGG CCGACGGGCT GTCGGTCGAG
GAAACGCTGA AGATCGCCAA CGACTACGAC CTCGTGATCA TCCACACGAG CACGCCGTCG
TTCCCGACCG ACGCGATGTT CGCGCAGGAC CTGAAGAAGA TGAAGCCGTC GATGCTGGTC
GGCATGGTCG GCGCGAAGGT GATGGTCGAT CCGCACAACT CGCTCACGGC GAGCGACGCA
ATCGACTTCG TGTGCCGCGA GGAATTCGAC TTCACCTGCA AGGAAATCGC CGAGGGCCGG
CCGTTCTCGC AGATCAAAGG CTTGAGCTGG CGCGCGAAGG ACGGCTCGAT CGAGCACAAC
GAAGCGCGTC CGATTCTCGA GAACATGGAC GAACTGCCGT TCGTCGCGCC CGTCTACAAG
CGCGACCTGA AGATCGACAA CTACTTCATC GGCTACCTCA ACTATCCGTA CGTATCGATC
TACACGGGCC GCGGCTGCAA GTCGCGCTGC ACGTTCTGCC TGTGGCCGCA GACGGTCAGC
GGCCATCGCT ACCGCACGCG CTCGGTCGAG AACGTGCTCG CGGAAGCCAA GTGGATCCGC
GACAACATGC CGGAAGTGAA GGAACTGATG TTCGACGACG ACACCTTCAC CGACGACCTG
CCGCGCGCCG AAGCCATCGC CATCGGCCTG GGCAAGCTCG GCATGACGTG GTCGTGCAAC
GCGAAGGCGA ACGTACCGTA CAAGACGCTG AAGGTCATGA AGGAGAACGG CCTGCGCCTG
CTGCTGGTCG GCTTCGAATC CGGCGACGAC CAGATCCTCG TGAACATCAA GAAGGGCGTG
CGCACCGATT TCGCGCGCCG CTTCAGCGCG GACTGCAAGA AGCTCGGCAT CAAGATCCAC
GGCACCTTCA TCCTCGGCCT GCCGGGCGAG ACGCAGGAAA CGATCAAGAA GACGATCGAG
TACGCGAAGG AAATCAATCC GCACACGATC CAGGTGTCGC TCGCCGCGCC GTATCCGGGC
ACGACGCTGT ACAAGCAGGC CGTCGAGAAC GGCTGGATGG AAGAGAACAA GACCATCAAC
CTGGTCAGCA AGGAAGGCGT GCAGCTCGCG GCGATCGGCT ATGCGCACCT GTCGCGCGAC
GAGATCTATC ACCAGCTCGA GCAGTTCTAT CGTCAGTTCT ACTTCCGTCC GTCGAAGATC
TGGGAGATCG TCCGCGAGAT GCTGACGAGC TGGGACATGA TGAAGCGCCG TCTGCGCGAA
GGCGTCGAGT TCTTCCGCTT CCTGCGCGCG CACGAGGCCT GA
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| Protein sequence | MKTLFLQAPS YDGFDGGAGS RYQAKREIRS FWYPTWLAQP AALVPGSRVV DAPADGLSVE
ETLKIANDYD LVIIHTSTPS FPTDAMFAQD LKKMKPSMLV GMVGAKVMVD PHNSLTASDA
IDFVCREEFD FTCKEIAEGR PFSQIKGLSW RAKDGSIEHN EARPILENMD ELPFVAPVYK
RDLKIDNYFI GYLNYPYVSI YTGRGCKSRC TFCLWPQTVS GHRYRTRSVE NVLAEAKWIR
DNMPEVKELM FDDDTFTDDL PRAEAIAIGL GKLGMTWSCN AKANVPYKTL KVMKENGLRL
LLVGFESGDD QILVNIKKGV RTDFARRFSA DCKKLGIKIH GTFILGLPGE TQETIKKTIE
YAKEINPHTI QVSLAAPYPG TTLYKQAVEN GWMEENKTIN LVSKEGVQLA AIGYAHLSRD
EIYHQLEQFY RQFYFRPSKI WEIVREMLTS WDMMKRRLRE GVEFFRFLRA HEA
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