Gene Bamb_1046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1046 
Symbol 
ID4308643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp1136759 
End bp1137619 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content69% 
IMG OID638148854 
Productpyridoxal kinase 
Protein accessionYP_772939 
Protein GI115351100 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2240] Pyridoxal/pyridoxine/pyridoxamine kinase 
TIGRFAM ID[TIGR00687] pyridoxal kinase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.48642 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACG TCCTCAGCAT TCAGTCGCAC GTGATCTACG GACACGCCGG CAACAGCGCG 
GCCGTGTTTC CGATGCAGCG CCTCGGCGTC AACGTCTGGC CGCTCAACAC CGTCCAGCTG
TCGAATCACA TGCAGTACGG CCACTGGGCC GGCAGCGCAA TCGACGCCGC GAAGATGGAG
CAGCTCGTCG ACGGCGTCGC CGCGATCGGC GCGCTCAAGC GCTGCGACGC GGTGCTGTCC
GGCTTCGTCG GCTCGCCGCC GCAGGCGCGC GCGACGGTCG AGATCGTGCG CACGGTGAAG
GCGATGAACC CGAACGCGTG GTACTTCTGC GATCCGGCGA TGGGCCAGAC GGGCGGCGTG
CGGCCCGAAC CCGGCGTCGA GGAATTCATC GTCCAGGAGA TGCCGGCGCT CGCCGACGGC
ATGTCGCCGA ACCACACCGA GCTGCAGAAG CTCGCCGGGC GGCGCATCGA GACCGTCGCC
GAAGCCGTCG ACGCGTGCCG CGCGCTGATC CGCCGCGGCC CGAAGATCGT CCTCGTCAAG
CACCTGCACG ATCGCAACAG CCCGGCCGAC CGTTTCAACA TGCTCGCCGT CACCGAAACC
GAAGCGTGGA TCGGCCAGCG CCCGCTGTAT GCGTTTCCGC GCCATCCGGT CGGCGTCGGC
GATCTCACCA GCGCCATTTT CGTCGCGCGC CGGCTGCGCG GCGACTCGGT GCGCGCCGCG
TTCGAGCACA CGCTCGCGGC CGTGCACGCG GTCGTGAAGG CGACCTACGA CGCGCGCCGC
TACGAGCTCG AACTCGTCGC CGCGCAGGAC GAAATCGCGC GCCCGAGCGA ATGGTTCGGC
GCGTGGGTGA CCGACGCGTG A
 
Protein sequence
MKNVLSIQSH VIYGHAGNSA AVFPMQRLGV NVWPLNTVQL SNHMQYGHWA GSAIDAAKME 
QLVDGVAAIG ALKRCDAVLS GFVGSPPQAR ATVEIVRTVK AMNPNAWYFC DPAMGQTGGV
RPEPGVEEFI VQEMPALADG MSPNHTELQK LAGRRIETVA EAVDACRALI RRGPKIVLVK
HLHDRNSPAD RFNMLAVTET EAWIGQRPLY AFPRHPVGVG DLTSAIFVAR RLRGDSVRAA
FEHTLAAVHA VVKATYDARR YELELVAAQD EIARPSEWFG AWVTDA