Gene Bamb_1037 details

Gene Information

• Locus tag: Bamb_1037
• ID: 4308634
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: -
• Start bp: 1124905
• End bp: 1126815
• Gene Length: 1911 bp
• Protein Length: 636 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 638148845
• Product: ABC transporter related
• Protein accession: YP_772930
• Protein GI: 115351091
• COG category: [V] Defense mechanisms
• COG ID: [COG1132] ABC-type multidrug transport system, ATPase and permease components

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGGATT ATTCAGTCCG AGCGCATGCC GGCATGCGAT CCAGCCGCCA CGCTCAATCA 
CCGAATCACC GCACGCATAT TTTGGAATCT CTTACCCCCG CCCAGCGCAA CGCCCACAAC 
GCGAAGCTCT CGAGCTACGC GCACCGGCCG ATCGCGTTCC TGTTCCGCTA CATCCGCCTG 
CATCCCGTTG CTCACCTCGT CGTGCTCTGC AGCGTGCTGG CTGCCGTCGG CTGCGCGCTC 
GGCTCGCAAT ACGCGATCAA GCACCTGATC GACGTGCTGG CGACCGGGCG CCATCATCCG 
GGCCCGCTGT GGAGCGCGTT CGCGCTGCTC GTCGGGCTGA TCGCGGCCGA CAACCTGCTG 
TGGCGGGTCG GCGGCTGGGC TGCCGCGCAC ACGTTCGTCG CGGTCACCGG CGACCTGCGG 
CGCGACCTGT TCCAGTATCT GATCGGCCAT TCGCCGACCT ACTACTCGGA AAAGCAGCCG 
GGCACGCTCG CAAGCCGCAT CACGGCCACG TCGAACGCCG TCTATACGTC GGAGAACACG 
ATGGCGTGGA ACGTGCTGCC GCCGTGCATC GCGGTGATGG GCGCGATCCT GATGATCATC 
GTCGTCAATC CGCTGATGGC CGCCGGCCTG CTCGGCTGCT CGGCCGTGCT GTCGATCATC 
CTGTTCAAGC TGGCCGGGCG CGGCTCGGCG CGCCACCATG CATTCGCGGC GAAGGCCGCG 
GCGGTCGACG GCGAGCTCGT CGACGTGATC GGCAACATGG GGCTCGTGCG TGCGTTCGGG 
ATGACGGTGC GCGAACAGAA GCGCTTCAGC GCAACGATCA AGGCGGAGAT GGACGCACGC 
CAGCAGAGCC TGTTCTATCT CGAGAAGCTG CGGCTGCTGC ATGCGGTGAT CACCGCGATG 
CTGTCGGCCG GCCTGCTCGG CTGGGCGCTG TGGCTGTGGG ACCAGGGCCG CGCGACGTCG 
GGCGACATCG TGCTCGTCAG CTCGCTCGGC TTCACGATCC TGCACGGCAC GCGCGACCTC 
GCGGTCGCGC TCGTCGACGT CACGCAGCAC GTCGCGCGCC TGTCCGAAGC CGTGAAGACG 
CTGCTCGAAC CGCACGGGAT GCCCGACCAC TCCGACGCGA AGCCGCTGGC GGCCACGGGC 
GGGCGCGTCG ATTTCGAACG GGTGACGTTC GCGTATCCGC ACCGCCGCGC GATCCTCGAC 
CACTTCGACC TCCATATCGA GCCGGGCCAG CGTGTCGGCC TCATTGGCAA GTCGGGCGCC 
GGCAAGTCGA CCGTGCTCGC GCTGCTGCAG CGCTTCTACG ACACGCAGGA CGGCGTCGTG 
AAGGTCGACG GCCAGGACGT GAAGGTGATC ACGCAGGACA GCCTGCGCCA CGCGATCGCG 
CTCGTGCCGC AGGACATCTC GCTGCTGCAC CGGACGATCT ACGACAACAT CGCCTATGGC 
CGCCCCGACG CGACCCGCGA GCAAGTGCTC GCCGCCGCGC GCGACGCGCG CTGCGCGGAG 
TTCATCGAAG CGATGCCGGA AGGCTATGAC ACGATCGTCG GCGACCGCGG CGTCAAGCTG 
TCGGGCGGCC AGCGCCAGCG CATCGCGATC GCGCGCGCGA TCCTGAAGGA TGCGCCGATC 
CTGCTGCTCG ACGAAGCGAC GTCCGCACTC GACAGCTCGT CCGAGGAAGC GATCCAGAGC 
GCGCTCGACC GCCTGATGGT CGGCCGCACG GTGATCGCGA TCGCGCACCG GCTGTCGACG 
CTGCGCAACT TCGACCGGAT CATCGTGATG AGCAACGGCA AGGTGATCGA CGACGGCAGC 
CCCGACGTGC TGCGCAACCG CCCCGGTCTG TACCGCGACC TGCTCGCGAA GCAGCACGGC 
CGCCATCACG CGCCCGACGG CACCGCGCCG ACCGGCGAAC GCGTGGCCTG A 

 

Protein sequence

MPDYSVRAHA GMRSSRHAQS PNHRTHILES LTPAQRNAHN AKLSSYAHRP IAFLFRYIRL 
HPVAHLVVLC SVLAAVGCAL GSQYAIKHLI DVLATGRHHP GPLWSAFALL VGLIAADNLL 
WRVGGWAAAH TFVAVTGDLR RDLFQYLIGH SPTYYSEKQP GTLASRITAT SNAVYTSENT 
MAWNVLPPCI AVMGAILMII VVNPLMAAGL LGCSAVLSII LFKLAGRGSA RHHAFAAKAA 
AVDGELVDVI GNMGLVRAFG MTVREQKRFS ATIKAEMDAR QQSLFYLEKL RLLHAVITAM 
LSAGLLGWAL WLWDQGRATS GDIVLVSSLG FTILHGTRDL AVALVDVTQH VARLSEAVKT 
LLEPHGMPDH SDAKPLAATG GRVDFERVTF AYPHRRAILD HFDLHIEPGQ RVGLIGKSGA 
GKSTVLALLQ RFYDTQDGVV KVDGQDVKVI TQDSLRHAIA LVPQDISLLH RTIYDNIAYG 
RPDATREQVL AAARDARCAE FIEAMPEGYD TIVGDRGVKL SGGQRQRIAI ARAILKDAPI 
LLLDEATSAL DSSSEEAIQS ALDRLMVGRT VIAIAHRLST LRNFDRIIVM SNGKVIDDGS 
PDVLRNRPGL YRDLLAKQHG RHHAPDGTAP TGERVA