| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1036 |
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| Symbol | |
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| ID | 4309228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 1123431 |
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| End bp | 1124810 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638148844 |
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| Product | alpha,alpha-trehalose-phosphate synthase (UDP-forming) |
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| Protein accession | YP_772929 |
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| Protein GI | 115351090 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0380] Trehalose-6-phosphate synthase |
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| TIGRFAM ID | [TIGR02400] alpha,alpha-trehalose-phosphate synthase [UDP-forming] |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCGAC TCATCATCGT TTCGAACCGC GTCGCCCCGA TTTCGGAAGG TGAACCGGCG
GCGGGTGGCC TCGCGATCGG CGTCTACGAT GCGCTGAAGG AGACGGGCGG CATGTGGTTC
GGCTGGAGCG GCGAGGTGGT CGCATCCGGT GCGCCGCAGA TCCGCATCGA GGAGCGCGGC
CCCGTGACGT TCGCGACCGT CGGGCTGTCG CGCCGCGATT ACGACCAGTA CTACCGCGGT
TTCTCGAACG CGACGCTGTG GCCCGCGTTC CATTACCGCG CCGACCTGAT CCAGTACGAC
CGCCACGAGT TCGACGGCTA CCGCCGCGTG AACGTGTGGC TCGCGCAGCA GCTCGTGCCG
CTGCTGCAGG ACGACGACGT GATCTGGGTG CACGACTATC ACCTGATCCC GTTCGCGCGT
GCGCTGCGGG AGGCCGGCGT GAAGAACCGC ATCGGCTTTT TCCTGCACAT TCCGTTTCCG
GCCGCGCAGG TGCTCGTCAA CGTGCCGCCG CATCGCGAGC TTGTCGAGTC GCTGTGCGCG
TTCGACTTGC TCGGCTTCCA GACCGAGCCC GACCTGCGCG CGTTCTGCGA CTACATCGAG
TTCGAGGCGG GCGGCGAAGT GGCGCGCGAA GGGCACACGG TGCGCGTGAG CGCGTTCGGC
AACACGCTGC GCGCGGCCGC CTATCCGATC GGCGTGTATC CGGACGAGAT CGCGTCGCTC
GCGCAGGCGG CCGAGAACGG CAAGGCCGTG CGCACGCTGG CGACGTCGCT GCGCGGGCGC
CAGTTGATCA TGAGCGTCGA CCGGCTCGAT TATTCGAAAG GGCTCGTCGA GCGGTTCCGC
GCGTTCGAGA AACTGCTGGA GCACCAGACG TCGATTCGCA ACCGCGTGTC GTTCCTGCAG
ATCGCGCCAT CGACGCGCGC CGACCTGCGC GCGTACCAGG ACATCCGCCT GCAGCTCGAA
GCGGAGTCGG GGCGCATCAA CGGCCGCTAC GCGGAACTCG ACTGGGCGCC GATCCTCTAC
ATTCACCGCC AGTACGACCG GCAGGTGCTG GCCGCGCTGT ACCGGCTGGC GCGCGTGGGT
TTCGTCACGC CGCTGCGCGA CGGCATGAAC CTCGTCGCGA AGGAGTACGT GTCCGCGCAG
AATCCGGACG ATCCGGGCGT GCTGGTGCTG TCGCGCTTCG CGGGCGCGGC GCGTGAGCTG
ACGGGCGCGC TGATCGTGAA TCCGATCGAC ATCGACGGAA TGGCCGATGC GTTGTCGCAG
GCGCTGACGA TGCCGCTCGC CGAGCGGCGC GCGCGTTATG CGGACATGAT CGCGCAGCTG
CGCGAGAACA ACGTGTCGGT GTGGCGCGAC AACTTCCTGC GCGACCTGCA GCGCGTGTAG
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| Protein sequence | MSRLIIVSNR VAPISEGEPA AGGLAIGVYD ALKETGGMWF GWSGEVVASG APQIRIEERG
PVTFATVGLS RRDYDQYYRG FSNATLWPAF HYRADLIQYD RHEFDGYRRV NVWLAQQLVP
LLQDDDVIWV HDYHLIPFAR ALREAGVKNR IGFFLHIPFP AAQVLVNVPP HRELVESLCA
FDLLGFQTEP DLRAFCDYIE FEAGGEVARE GHTVRVSAFG NTLRAAAYPI GVYPDEIASL
AQAAENGKAV RTLATSLRGR QLIMSVDRLD YSKGLVERFR AFEKLLEHQT SIRNRVSFLQ
IAPSTRADLR AYQDIRLQLE AESGRINGRY AELDWAPILY IHRQYDRQVL AALYRLARVG
FVTPLRDGMN LVAKEYVSAQ NPDDPGVLVL SRFAGAAREL TGALIVNPID IDGMADALSQ
ALTMPLAERR ARYADMIAQL RENNVSVWRD NFLRDLQRV
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