Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_1030 |
Symbol | |
ID | 4309222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 1118920 |
End bp | 1119786 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638148838 |
Product | pirin domain-containing protein |
Protein accession | YP_772923 |
Protein GI | 115351084 |
COG category | [R] General function prediction only |
COG ID | [COG1741] Pirin-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.773031 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAGA TCCAGGGTGT TTACAGCGCG CCGCGTGGCC ATTGGGTCGG CGACGGTTTC CCGGTGCGTT CGATGTTCAG CTATCAGTCT CACGGGGCGC ACCTCAGCCC GTTCCTGCTG CTCGACTACG CGGGCCCCGC GAACTTCGAG CCGGCTTCGG CACCGCGCGG GGTGGGGCAG CACCCGCACC GCGGGTTCGA AACCGTGACG ATCGTCTATG ACGGCGAAGT CGCTCACCGC GACTCGACCG GCGCGGGCGG CGTGATCGGC CCGGGCGACG TGCAGTGGAT GACGGCCGCG AGCGGGATCC TCCACGAGGA ATTCCACTCG GAGGCCTTCA CGAAGCGCGG CGGTCCGCTC GAGATGGTGC AGCTGTGGGT GAACCTGCCC GCCGCCGACA AGATGGGCAC GCCCGGCTAC CAGACGCTGC TGAACGCGGA CATCCCGGTG GTCGAGCTGC CGGACGGTGC GGGGCGTGCG CGGATCATCG CGGGCGAATT CGACGGACGG CGCGGCCCGG CCCGCACGCA CACGCCGATC GACGTGTGGG ACGTGCGGCT CGCAGCCGGC GGCCGCGCGC GGTTCCCGAT CGCCGAAGGG CGGACGCTCG CGGTGGTGGT GCTGAACGGT ACGCTGCTGG TGAACGGCGA GACGGTCGCC CGCGAAGCGC AGTTCGTGCA ACTGAGCCGC GACGGCCGCG ACGTCGAGAT CGAAGCGAAC GGCGACGCCA AGCTGTTGAT TTTGAGCGGC GAGCCGATCG ATGAGCCGGT CGTCGGCTAC GGGCCGTTCG TGATGAACTC GCAAGAGGAA ATCCGGACCG CGATCGACGA TTTCAACAAC GGCCGCTTCG GCCAGATGCC GGCATGA
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Protein sequence | MKKIQGVYSA PRGHWVGDGF PVRSMFSYQS HGAHLSPFLL LDYAGPANFE PASAPRGVGQ HPHRGFETVT IVYDGEVAHR DSTGAGGVIG PGDVQWMTAA SGILHEEFHS EAFTKRGGPL EMVQLWVNLP AADKMGTPGY QTLLNADIPV VELPDGAGRA RIIAGEFDGR RGPARTHTPI DVWDVRLAAG GRARFPIAEG RTLAVVVLNG TLLVNGETVA REAQFVQLSR DGRDVEIEAN GDAKLLILSG EPIDEPVVGY GPFVMNSQEE IRTAIDDFNN GRFGQMPA
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