Gene Bamb_1020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1020 
Symbol 
ID4309212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp1110108 
End bp1110695 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content64% 
IMG OID638148824 
ProductCDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 
Protein accessionYP_772913 
Protein GI115351074 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID[TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00230186 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGTTCA ATTTCCCGAT TTTCCTGACG TGGGTCCGGA TCGTGCTGAT TCCGCTCGTC 
GTCGGCGTGT TCTATCTGCC GGACACGGTG ATGGGCGGCG CGCACCGCAA CCTCGCGGCA
GCGGCGATCT TCATCCTAGC CGCGCTGACC GACTGGTTCG ACGGGTTTCT CGCCCGCAAA
TGGAACCAGA CGTCGTCGTT CGGCGCGTTC CTCGATCCGG TCGCGGACAA GCTGATGGTG
ACGGCCGCGC TGCTGATCCT CGTGCAGATT TCGCGGGTCG ATGCGGCGAT CGCGCTGGTG
ATCGTCGGTC GCGAGATCGC GATCTCGGCG CTGCGTGAAT GGATGGCACA GATCGGCGCG
TCGAAGAGCG TCGCGGTGAA TCAGCTCGGC AAGTTCAAGA CCGCGTGCCA GATGGTCGCG
ATTCCGATGC TGCTGTACTA CGGCCCGCTG CCGCTCGGCA TCGCGACGAT CGACACGCGC
GTGTGGGGCG AGTGGCTGAT GTATCTCGCG GCGGTGCTGA CGATCTGGTC GATGCTGTAC
TACATGAAGC TCGCATGGCC GCAGATTCGC GAGCGCGGCG GCGCGTGA
 
Protein sequence
MPFNFPIFLT WVRIVLIPLV VGVFYLPDTV MGGAHRNLAA AAIFILAALT DWFDGFLARK 
WNQTSSFGAF LDPVADKLMV TAALLILVQI SRVDAAIALV IVGREIAISA LREWMAQIGA
SKSVAVNQLG KFKTACQMVA IPMLLYYGPL PLGIATIDTR VWGEWLMYLA AVLTIWSMLY
YMKLAWPQIR ERGGA