Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_1009 |
Symbol | |
ID | 4310944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 1097722 |
End bp | 1098615 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638148813 |
Product | signal peptidase I |
Protein accession | YP_772902 |
Protein GI | 115351063 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0681] Signal peptidase I |
TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.225972 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTTG CGCTGATTCT TTTTGTGCTC GTCGTCGTGA CGGGCGTAGC GTGGGTGTTG GACAAACTGG TGTTCCTGCC GCGGCGACGC AAGGCGGCCG ACGTGGCGAT CGAAGAGTTC GATCGCCAGC AGTCGCGCAT CGACAAGCGT TTCGCGGACG AAAACGCGGT GCAGACGCGT TCGAAGCTGC GCGACGAAAA GCTGCGCCAG CCGTGGTGGC TCGAGTACAC CGCGAGCTTC TTCCCGGTGA TCCTGGCCGT GTTCGTCGTG CGTTCGTTCA TCGTCGAGCC GTTCAAGATC CCGTCGGGCT CGATGGTGCC GACGCTGCTG GTCGGCGACT TCATCCTCGT CAACAAGTTC GAATACGGTC TGCGCCTGCC GATCACGAAC ACGAAGATCA CGCAAGGCAG CCCGCTGTCG CGCGGCGACG TCGTCGTGTT CCGCTATCCG AAGGACGAGT CGGTCGATTA CATCAAGCGC GTGATCGGCC TGCCGGGCGA CACGGTCGCC TACCAGGACA AGCAGCTGAC GATCAACGGC CAGCCGGTGC CCGAGGCGCC GCTGCCGGAT TTCTTCGATG ACGAGCGCCA GAACTACGCG AAGCAGTTCG AGGAAACGAT CGGCACGAAG AAGAATGCGA TCCTCAACAA TCCCGCCGTG CCGCCGTTCG TGATGGGCGC CTACGACTAT CCGTATCGCG ACAATTGCAC GTACAACAGC CGCGGCGTGA TCTGCAAGGT GCCGCCGGGT CACTACTTCA TGATGGGCGA TAACCGCGAC AACAGCGCGG ACAGCCGCTA CTGGGGTTTC GTGCCGGACA ACAACATCGT CGGCCGCGCG TTCTTCATCT GGATGAACTT CGGCGACCTG AAGCGGATCG GTTCCTTCAA CTGA
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Protein sequence | MNFALILFVL VVVTGVAWVL DKLVFLPRRR KAADVAIEEF DRQQSRIDKR FADENAVQTR SKLRDEKLRQ PWWLEYTASF FPVILAVFVV RSFIVEPFKI PSGSMVPTLL VGDFILVNKF EYGLRLPITN TKITQGSPLS RGDVVVFRYP KDESVDYIKR VIGLPGDTVA YQDKQLTING QPVPEAPLPD FFDDERQNYA KQFEETIGTK KNAILNNPAV PPFVMGAYDY PYRDNCTYNS RGVICKVPPG HYFMMGDNRD NSADSRYWGF VPDNNIVGRA FFIWMNFGDL KRIGSFN
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