Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_1008 |
Symbol | |
ID | 4310943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 1095912 |
End bp | 1097705 |
Gene Length | 1794 bp |
Protein Length | 597 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638148812 |
Product | GTP-binding protein LepA |
Protein accession | YP_772901 |
Protein GI | 115351062 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0481] Membrane GTPase LepA |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01393] GTP-binding protein LepA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATCATA TTCGCAATTT CTCGATCATC GCGCACATCG ACCATGGCAA GTCGACACTC GCGGATCGCA TCATCCAGGT ATGCGGCGGT CTCGCCGACC GTGAAATGGA GGCGCAAGTA CTCGACTCGA TGGATATCGA GCGCGAGCGC GGCATCACGA TCAAGGCGCA GACGGCGGCA CTGTCCTATC GCGCCCGCGA CGGCAAGGTC TACAACCTCA ACCTGATCGA TACGCCCGGG CACGTCGACT TCTCGTACGA GGTCAGCCGT TCGCTGTCCG CGTGCGAAGG CGCGCTGCTC GTGGTCGACG CGAGCCAGGG TGTCGAGGCG CAGACGGTCG CGAACTGCTA CACGGCGATC GAGCTCGGCG TCGAGGTCGT GCCGGTGCTG AACAAGATCG ACCTGCCGGC CGCGAACCCC GAGAACGCGA TCGAGGAGAT CGAGGACGTG ATCGGCATCG ATGCGACCGA CGCGACGCGC TGCAGCGCGA AGACGGGCCT CGGCGTCGAG GACGTGCTCG AGTCGCTGAT CGCGAAGGTG CCGCCGCCGA AGGGCGATCC GGCCGCGCCG CTGCAGGCGC TCATCATCGA TTCCTGGTTC GACAATTACG TCGGCGTCGT GATGCTCGTG CGCATCGTCA ACGGCACGCT GCGCCCGAAG GAAAAGATCA AGATGATGGC GACCGGCGCG CAGTATCCGG TCGAGCACGT CGGCGTGTTC ACGCCGAAGT CGCGCAATCT CGAATCGCTG TCGGCCGGGC AGGTGGGCTT CATCATCGCC GGCATCAAGG AGCTGACGGC CGCGAAGGTC GGCGACACGG TTACGCATGT GGCGAAGGCC GCCAGCGAGC CGCTGCCGGG CTTCAAGGAA GTGAAGCCGC AGGTGTTCGC GGGGCTGTAT CCGGTCGAGG CGAACCAGTA CGATGCGCTG CGCGAATCGC TCGAGAAGCT GAAGCTCAAC GACGCATCGC TGCAGTACGA GCCGGAAGTG TCGCAGGCGC TCGGCTTCGG TTTCCGCTGC GGCTTCCTCG GGCTGCTGCA CATGGAAATC GTGCAGGAGC GGCTTGAGCG CGAGTTCGAC ATGGATCTCA TCACGACCGC GCCGACGGTC GTCTACGAGG TCGTGCAGAG CGATGGCTCG ACGATCATGG TCGAGAACCC GGCGAAGATG CCGGAGCCCG GCCGCATCGC CGAAGTTCGC GAGCCGATCG TCACCGTGAA CCTGTACATG CCGCAGGATT ACGTCGGCTC CGTGATCACG CTGTGCGAGC AGAAGCGCGG CTCGCAGATC AACATGCAGT ATCACGGCCG CCAGGTGCAG CTCACGTACG AGATCCCGAT GGCCGAGATC GTGCTCGACT TCTTCGATCG CCTGAAGTCG GTGTCGCGCG GCTATGCGTC GATGGACTAC GAGTTCAAGG AATACCGTTC GTCGGACGTC GTGAAGGTCG ACATGCTGAT CAACGGCGAC AAGGTCGATG CACTATCGAT CATCGTGCAC CGGTCGCAGT CGCAGTATCG CGGTCGCGAA GTCGCCGCGA AGATGCGCGA GATCATTCCG CGCCAGATGT ACGACGTGGC GATCCAGGCC GCGATCGGCG CGCACATCGT CGCCCGCGAG AACATCAAGG CACTCCGCAA GAACGTGCTC GCGAAGTGCT ACGGCGGCGA CATCACGCGG AAGAAGAAAC TGCTCGAGAA GCAGAAAGAA GGCAAGAAGC GCATGAAGCA GGTGGGTTCG GTCGAGATCC CGCAGGAAGC GTTCCTCGCG ATCTTGCGCG TCGAAGACAA ATAA
|
Protein sequence | MDHIRNFSII AHIDHGKSTL ADRIIQVCGG LADREMEAQV LDSMDIERER GITIKAQTAA LSYRARDGKV YNLNLIDTPG HVDFSYEVSR SLSACEGALL VVDASQGVEA QTVANCYTAI ELGVEVVPVL NKIDLPAANP ENAIEEIEDV IGIDATDATR CSAKTGLGVE DVLESLIAKV PPPKGDPAAP LQALIIDSWF DNYVGVVMLV RIVNGTLRPK EKIKMMATGA QYPVEHVGVF TPKSRNLESL SAGQVGFIIA GIKELTAAKV GDTVTHVAKA ASEPLPGFKE VKPQVFAGLY PVEANQYDAL RESLEKLKLN DASLQYEPEV SQALGFGFRC GFLGLLHMEI VQERLEREFD MDLITTAPTV VYEVVQSDGS TIMVENPAKM PEPGRIAEVR EPIVTVNLYM PQDYVGSVIT LCEQKRGSQI NMQYHGRQVQ LTYEIPMAEI VLDFFDRLKS VSRGYASMDY EFKEYRSSDV VKVDMLINGD KVDALSIIVH RSQSQYRGRE VAAKMREIIP RQMYDVAIQA AIGAHIVARE NIKALRKNVL AKCYGGDITR KKKLLEKQKE GKKRMKQVGS VEIPQEAFLA ILRVEDK
|
| |