Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_1005 |
Symbol | |
ID | 4310940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 1092886 |
End bp | 1093938 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638148809 |
Product | sigma E regulatory protein, MucB/RseB |
Protein accession | YP_772898 |
Protein GI | 115351059 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3026] Negative regulator of sigma E activity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGACAT TGCAGTTGAA TCACGCCATC TCCGGATGGA AGCGGCTGCC GGCCCTCCTG CTTTGCGCAG CCGCCCTGTT GTCCGTTCAA TCCCTCCCTG CCAGCGCCCA GCAACCGGAC GATCCCGTCG CGACCCGCAA GGGTGCGGCG GAGTGGCTCG ACCGCATCCA GCAGGCGGCG CAGCAGCAGA GCTACGAGGG CACGTTCGTC TACCAGCGCG GCGCGTATGT CCAGTCGTCG CGCATCGCGC ACGTGGCGTC CCGCGACGGC GAGTTCGAGC GGATCGAAAC GCTCGACGGC AAGCCGCGCA AGGTGCTGCG GCATAACGAC GAGCTGTACA CGTTCGTGCC GGAGCGCAAG CTGTGCGTGG TCGAGCGCCG CCAGACGCGC GACTCGTTTC CTTCGCTGCT CGGCGCGGGC GGCGAGCACG TGATGTCCGT CTACGACGCG AAGCTGCTCG GCAAGGACCG CGTGGCGGGG CTCGACGCGC AAGTCGTCGA ACTCGTGCCG AAGGATGCGT ACCGCTTCAC GTACAAGCTG TGGGCCGACG CCCGGACGGG GCTGCTGCTG CGTTCGCAGA CGCTCGACGC GAGCGATCAC GTGCTCGAGC AGATCGCGTT CTCGCAAGTC CAGACGGGCG GCACGTCCGG CGACAAGGCC GCGATCGCGG CCGGCATGCG CAATTTGAGC GGCTGGACGG TCGTCCGCCC GCCGGTCGCG ACGGTCGACA TGGAAGCGCA GGGCTGGCAG ATCGCGCCGA ACGTCGCCGG CTTCCGGAAG ATTCGCGAGG TGCGCCGCCC GATGGCCGCG CGCGACGCCG GCGATCCGCC GATTCCGGTC GACCAGGCCG TCTTCACCGA CGGGCTCGCG ACGATCTCCG TCTTCATCGA GCCGGCTGAA AAGAACACGC GCAAGGAAGG CGCGGGCAGC ACCGGTGCGA CCCACGTTCT CGTGAAGCGT CGCGGCGACT ACTGGATCAC CGTGCTCGGC GAAGTGCCGC CGGCCACGTT GCAGCAGTTC GCGGCTGCCA TAGAATACAA GGCTTCCAAG TAA
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Protein sequence | MRTLQLNHAI SGWKRLPALL LCAAALLSVQ SLPASAQQPD DPVATRKGAA EWLDRIQQAA QQQSYEGTFV YQRGAYVQSS RIAHVASRDG EFERIETLDG KPRKVLRHND ELYTFVPERK LCVVERRQTR DSFPSLLGAG GEHVMSVYDA KLLGKDRVAG LDAQVVELVP KDAYRFTYKL WADARTGLLL RSQTLDASDH VLEQIAFSQV QTGGTSGDKA AIAAGMRNLS GWTVVRPPVA TVDMEAQGWQ IAPNVAGFRK IREVRRPMAA RDAGDPPIPV DQAVFTDGLA TISVFIEPAE KNTRKEGAGS TGATHVLVKR RGDYWITVLG EVPPATLQQF AAAIEYKASK
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