Gene Bamb_0994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0994 
Symbol 
ID4311498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp1084285 
End bp1084920 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content62% 
IMG OID638148798 
Producthypothetical protein 
Protein accessionYP_772887 
Protein GI115351048 
COG category[R] General function prediction only 
COG ID[COG1399] Predicted metal-binding, possibly nucleic acid-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACTT CTTCTGGCAA GCCGGCGGCA TCGCTTGATC CGCACGCAGT CGACCTGTTC 
GAATTCGCCC GCAGCGGGCG GCAGGCAGCG GGTGCGGTGC GTCTGTCGCA ACTGCCGCGC
ATGTTAAACG AAGTGCCGGT GGACGCGCCA GATCGCGACA CGGTCTTCAC GTGGCAGGCC
GAAGGGTTCA CCCAGAAGGA GTTGCAGGAC GACGGCGCCG ATGGGCAGCA GCCGTATCTG
CGACTCGCGG TGCACGGCCA TGCGTGGCTC ACGTGCCAGC GCTGCATGAC TCCGTACGAC
GAGACGTTCG ACGTCGACAT GACGTACCGG GTCGTTGCGA CCGAAGAAGA AGCTGAAGAA
TTTCCGCTCG ACGACGATGA AGCCGATGTG ATCGTGGGCA CACGCCAGTT CGATCTCGTC
GACTTGATCG AAGAGGAATT GCTGCTTTCG TTGCCGCTCG TGCCCAAGCA CGAGGTTTGC
CCGGCAGTTC ACGAAAGCCT CGTGTCGGGT GTGAGCGGTC CTTCGGAAGA GGCGGACGAC
GAGTCCGCCG AAGACGAGGA CGAAGGCAAA CGGCCGAATC CGTTCGCAGC GCTGCAAGCG
TTGAAGAAGG ACGGGGACGG CAGCAAGAAA CACTAA
 
Protein sequence
MNTSSGKPAA SLDPHAVDLF EFARSGRQAA GAVRLSQLPR MLNEVPVDAP DRDTVFTWQA 
EGFTQKELQD DGADGQQPYL RLAVHGHAWL TCQRCMTPYD ETFDVDMTYR VVATEEEAEE
FPLDDDEADV IVGTRQFDLV DLIEEELLLS LPLVPKHEVC PAVHESLVSG VSGPSEEADD
ESAEDEDEGK RPNPFAALQA LKKDGDGSKK H