Gene Bamb_0990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0990 
Symbol 
ID4311494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp1081208 
End bp1081618 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content72% 
IMG OID638148794 
ProductRieske (2Fe-2S) domain-containing protein 
Protein accessionYP_772883 
Protein GI115351044 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCGG CGCCGGAAGC CGTGCGCGTG TGCGCGTCGG ACGCCTTGAC CGACGGCGGC 
GCCGGCGTGC GCGTCGAAGC GACGCTGCGC GGCGAGCAGG CGGTCGTGTT CTTCGTACGC
TACGACGGAC GTGCGTACGG CTACCTGAAC CGCTGCGCAC ACGTGCCGAT GGAGCTCGAC
TGGGCCGAAG GGCAGTTCTT CGAGTCGTCG GGCCTCTACC TGATGTGCGC GACGCACGGT
GCGATCTACG CGCCGGACAC CGGCAAGTGC GTCGGCGGCC CGTGCCGCGG CGGCCGCCTG
CGGCCGGTGG AGGTCGACGA GCGCGACATG CCCGACGGCC GTGCGGTATT CTGGGTGCCC
GATGCCGACC TGCGTCCCGC CGCTTCGACT CCTTCCGCCA CGACCGACTG A
 
Protein sequence
MSAAPEAVRV CASDALTDGG AGVRVEATLR GEQAVVFFVR YDGRAYGYLN RCAHVPMELD 
WAEGQFFESS GLYLMCATHG AIYAPDTGKC VGGPCRGGRL RPVEVDERDM PDGRAVFWVP
DADLRPAAST PSATTD