| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0986 |
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| Symbol | |
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| ID | 4311490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 1075614 |
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| End bp | 1078820 |
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| Gene Length | 3207 bp |
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| Protein Length | 1068 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638148790 |
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| Product | ribonuclease |
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| Protein accession | YP_772879 |
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| Protein GI | 115351040 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.41392 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGCA TGCTGTTCAA TGCGACGCAG CAGGAGGAGC TGCGCGTCGC CATCGTCGAT
GGGCAAAAGC TCATCGACAT CGACATCGAG ACAGCCGGGC GCGAACAGCG CAAAGGCAAT
ATCTACAAAG GTGTCATCAC CCGTATCGAG CCGTCGCTCG AAGCGTGCTT CGTCAACTAC
GGCGAAGACC GCCACGGCTT CCTGCCGTTC AAGGAAGTCG CCCGCCAGTA CTTCAAGGAC
GGCATCGACA TGCGCTCCGC GCGCATCCAG GATGCGCTGC GCGAAGGCCA GGAACTGATC
GTTCAGGTCG AGAAGGAAGA GCGCGGCAAC AAGGGCGCCG CCCTCACGAC CTTCATCTCG
CTCGCCGGCC GCTACCTCGT GCTGATGCCG AACAATCCGC GCGGCGGCGG CGTGTCGCGC
CGGATCGAAG GCGACGAGCG CCAGGAACTG CGCGAAACGA TGGCGCAGCT GCAGATTCCG
GACGGCATGA GCATGATCGC CCGCACCGCG GGCATCGGCC GCAGCGCCGA GGAACTGCAG
TGGGACCTGA ACTACCTGCT GCAGCTGTGG CGCGCGATCG AAGCGGCGTC GCAAAGCGGC
AATGCCGGCC AGCCGATGCT GATCTATCTG GAATCGAGCC TCGTGATCCG CGCGATCCGG
GACTATTTCC AGCCCGATAT CGGCGAAATC CTGATCGACA CGACCGAGAT CCACGATCAG
GCCCGTGCGT TCATGGACAT CGTGATGCCG GACAACGTGT CGAAGGTGAA GCGCTACCAC
GACGACGTGC CGCTCTTCTC CCGCTTCCAG ATCGAGCACC AGATCGAGAC GGCCTACTCG
CGCACGGTGC CGCTGCCGTC CGGCGGCGCG ATCGTGATCG ACCACACCGA AGCACTCGTC
GCGATCGACG TGAACTCGGC GCGCGCGACC AAGGGCGCGG ACATCGAGGA AACGGCGACC
CGCACGAACC TCGAGGCGGC GGACGAAGTG GCCCGCCAGC TGCGACTGCG CGACCTCGGC
GGCCTGATCG TGATCGACTT CATCGACATG GAGTCGGCCA AGAGCCAGCG TGAGGTCGAG
CAGCGCCTGA AGGACGCGCT CAAGCACGAC CGTGCGCGCG TGCAGATGGG CAAGATCTCC
CGCTTCGGGC TGATGGAACT GTCGCGCCAG CGCCTGCGTC CGGCGCTGTC GGAAGGCAGC
CACGTGACGT GCCCGCGCTG TAACGGCACC GGCCACATCC GCGATACCGA ATCGTCCGCG
CTGCAGGTCC TGCGGATCAT TCAGGAAGAA GCGATGAAGG AAAACACCGC GGCGATCCAC
TGCCAGGTGC CGGTCGAGGT GACCGCCTTC CTGCTCAACG AGAAGCGTCA GGAAATCAAC
AAGATCGAGT CGCGCTTCAA GGTCGGCATC GTGCTGATCC CGAACAAGCA CCTCGATACG
CCGCACTACA AGCTCGAGCG CCTGCGCCAC GACGACGCGC GCCTCGACGA TCCGCGCGCG
TCCTGGAAGA TGGCCGAGGA AGCCGCCCGC GAACTGGAGT CGGAAACCGG CTACAGCAAG
CGCACGGCCG ACGTGAAGCC GAAGCAGGAA GCGGCGGTCA AGGGCATCAC GCCCGAGCGC
CCGGCGCCGA GCGCGGCACC GCAGCGCCCG GCCGAGCCGG TTGTGGCGGC GCCCGCCCCG
GTCGCCGTGG CAAGCAACGG CGGCTTCATC GGCTGGCTGA AGGGTCTGTT CGGCATGTCG
CCGGCTCCGG CGCCCGCGCC GGTTGTACCG GCACCGGCGA AGGAACAGGC TGCCCGCCCG
GCCCGCGAGC GGACCGAGAA GACCGAGCAG CGCGGCGGCG ATCGCAACCG CAACCGCCGT
GGCGGCGCCC AGCAGGCTCA GGGTGGCCGC GACCAGGCAG CGACGGGCCG TGGCCAGTCG
CAACGCCAGG AACGCGAAGG CAAGGAAATT CGCGAGCCGC GTGAACCGCG TGAACCGCGC
GAGGGTCGTG AACCGCGTGA AAGCCGCGAG CCGCGCGAAA GCCGTGAGGG TCGCGAAGGT
CGTGAGGGCC GTGGCCCGCG CGAAGGCCGC GAACCGCGCG AGCCGCGTGA AAGCCGTGAG
AGCCGCGAGC CGCGCGAGAG TCGCGAACCG CGCGAGCGCG TCGAGCAGCC GGAAGCCGTC
GAGGCCGGCG GCCGCGGCGA GCGCCAGGAA CGCGGCGAAC GTCGCGAGCG TGGTGAGCGC
CGCAAGCCGG TGCAGCACGC GGCGACGCTC GAGACCGTCA ACCGTGGCGA GAACCATCCG
GAAGCGGAAG CAGACCAGGC AGTCGCAGCG CTGCCGGGCG CCGATATCGG TGCCGACGCG
GAAGCCGGCG CACGTGACGG CGAGGAACGT CGCCGTCGCC GCCGCGGCCG CCGCGGTGGT
CGTCGCGAGC GCGAGGACGA TGGTTCGGTG GTCGAGCACG CCGAGCAAGG TGCAGATGGC
GAAGCCCCCG TGCACGCCGT GACGACGGAA GCCCCGAACG CGGTCGAGCC GGCCCGTGCG
GCCGCACCGG TCGCCGTGGC GTCCATGGCA GCCGTTTCGG CAGCAGGCGC CGCAGTTGCG
GAAGCCGAAG TCGAGGAGCG TGCCGAAGCG GTCGCACCGG CCGCGGTCGA GTCGCAAACG
GCACCCGTTC GTGTCGAAGC GACGCCGGTC GCACCGCTCG AGCCCGCCCC GGTCGCACCG
GCAGCCGAAC CGGCACCGGT CACGCCGGCC GCTGAATCGG AAGCCGGCCC GGCTCCGGTC
GCGGTTTCGC CGACCGATGC GTTCGAAGTG CCGGCCGCAC CGGCTGCCGT CGAAGCGCCG
CAGTCCGCGC CCGTCGAGCA AGCCGCACCG GCACCAGTCG TCGCAGCTGA AGTCGCTCCG
GCACCCGTCG CGCCGGCACC GGTCGCTCCG GTTCACGTCG CTCCGGTTCA CGTCGAACCG
GCTCGCGTCG AAGCCGCACC GGCTCCGGCT CCGGCTCCGG CTCCGGCTCC GGCGCCCGCC
CAGCCGGCCG CCGCGCCTGC TTCGGCGAGC CTCGATGCCG TGCTGGAGCA AGCCGGTCTC
GTGTGGGTGA ACACGGACGC CGACAAGTTC CGCGCTGCCC AGGAAGCCGC GTCGCGCCTG
CCGCGTCCGG CCCGCGTGCC GCGCGAGCGC AAGGCGCAGC CGCCGGTCGA CCCGACCCCG
ATGCAGCAGG TCGAAACGCA CCGCTAA
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| Protein sequence | MKRMLFNATQ QEELRVAIVD GQKLIDIDIE TAGREQRKGN IYKGVITRIE PSLEACFVNY
GEDRHGFLPF KEVARQYFKD GIDMRSARIQ DALREGQELI VQVEKEERGN KGAALTTFIS
LAGRYLVLMP NNPRGGGVSR RIEGDERQEL RETMAQLQIP DGMSMIARTA GIGRSAEELQ
WDLNYLLQLW RAIEAASQSG NAGQPMLIYL ESSLVIRAIR DYFQPDIGEI LIDTTEIHDQ
ARAFMDIVMP DNVSKVKRYH DDVPLFSRFQ IEHQIETAYS RTVPLPSGGA IVIDHTEALV
AIDVNSARAT KGADIEETAT RTNLEAADEV ARQLRLRDLG GLIVIDFIDM ESAKSQREVE
QRLKDALKHD RARVQMGKIS RFGLMELSRQ RLRPALSEGS HVTCPRCNGT GHIRDTESSA
LQVLRIIQEE AMKENTAAIH CQVPVEVTAF LLNEKRQEIN KIESRFKVGI VLIPNKHLDT
PHYKLERLRH DDARLDDPRA SWKMAEEAAR ELESETGYSK RTADVKPKQE AAVKGITPER
PAPSAAPQRP AEPVVAAPAP VAVASNGGFI GWLKGLFGMS PAPAPAPVVP APAKEQAARP
ARERTEKTEQ RGGDRNRNRR GGAQQAQGGR DQAATGRGQS QRQEREGKEI REPREPREPR
EGREPRESRE PRESREGREG REGRGPREGR EPREPRESRE SREPRESREP RERVEQPEAV
EAGGRGERQE RGERRERGER RKPVQHAATL ETVNRGENHP EAEADQAVAA LPGADIGADA
EAGARDGEER RRRRRGRRGG RREREDDGSV VEHAEQGADG EAPVHAVTTE APNAVEPARA
AAPVAVASMA AVSAAGAAVA EAEVEERAEA VAPAAVESQT APVRVEATPV APLEPAPVAP
AAEPAPVTPA AESEAGPAPV AVSPTDAFEV PAAPAAVEAP QSAPVEQAAP APVVAAEVAP
APVAPAPVAP VHVAPVHVEP ARVEAAPAPA PAPAPAPAPA QPAAAPASAS LDAVLEQAGL
VWVNTDADKF RAAQEAASRL PRPARVPRER KAQPPVDPTP MQQVETHR
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