Gene Bamb_0977 details

Gene Information

• Locus tag: Bamb_0977
• ID: 4311428
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: +
• Start bp: 1066733
• End bp: 1067395
• Gene Length: 663 bp
• Protein Length: 220 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 638148781
• Product: hypothetical protein
• Protein accession: YP_772870
• Protein GI: 115351031
• COG category: [S] Function unknown
• COG ID: [COG1556] Uncharacterized conserved protein

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.0260458
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACACTT CCGCTGCCCG TCGCCAGATC CTCGCACGCA TTCGCGCGGC GCAAGGACGC 
GCGCCCGAAC CCGATGCAGC GGAGCGCGAC GGCGTCGCCG AGTATCTCGC TCGCCATCCC 
GAGGGGCCGC GCCCGCCGAT GCCGGCCGAC CTCGTCGCCG CATTCGTCGA CGAAGCGGCG 
CGCCTGTCGA CGACGGTCGA CGAAGTCGCG ACGCTGGCCG ATGCGCCCGC CGCCGCCGCC 
CGCTATCTTG CCGCTCACGG CCTGCCGATG CAGGCCGTCG CCTGGCGCGC GCTCGCCGAG 
CTCGACTGGG CCGGCGCGGG CCTGTCGGTC GAATGCCGCA AGCCGCGCGA CGGCGATCTC 
GTCGGCCTGA CCGGCTGCTT TTGCGCCACC GCCGAAACGG GTTCGCTGGT GCTGTTGTCC 
GGCCCCGACA CCTACGCGTC GGCCGCGCTG CTGCCGGAGA CGCACATCGC GATCGTGCCG 
GCGTCGCGGA TCGTCGCAGG CCACGAAGAC GCATTCGCGC TGATTCGCGC GGAGCGCGGC 
GAATTGCCGC GTGCGGTCAA TTTCGTATCG GGGCCGTCGC GCACGGGCGA TATCGAACAG 
ACCATCGTGC TGGGCGCACA CGGCCCGTAC CGCGTTCACG CGATCGTCGT GCGCGGCGCA 
TGA 

 

Protein sequence

MDTSAARRQI LARIRAAQGR APEPDAAERD GVAEYLARHP EGPRPPMPAD LVAAFVDEAA 
RLSTTVDEVA TLADAPAAAA RYLAAHGLPM QAVAWRALAE LDWAGAGLSV ECRKPRDGDL 
VGLTGCFCAT AETGSLVLLS GPDTYASAAL LPETHIAIVP ASRIVAGHED AFALIRAERG 
ELPRAVNFVS GPSRTGDIEQ TIVLGAHGPY RVHAIVVRGA