| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0972 |
|---|
| Symbol | |
|---|
| ID | 4311423 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | - |
|---|
| Start bp | 1062055 |
|---|
| End bp | 1062828 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638148774 |
|---|
| Product | AzlC family protein |
|---|
| Protein accession | YP_772865 |
|---|
| Protein GI | 115351026 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) |
|---|
| TIGRFAM ID | [TIGR00346] 4-azaleucine resistance probable transporter AzlC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00116086 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAAGC GTCCCTTGAA TCCCCCATCC ACACCGTCGC CCCCGCCGCG CAGTCCATTC
AACGAATGGC TCGACGGCGC GCGCGACACG ATCCCGATGA TGATCGGCGC GGCGCCGTTC
GGCGTGATCT TCGGCACGCT CGTCGCCGGC GGGCCGCTGG CCGCCTGGCA CGGCGCGCTG
ATGTCGCTCG CGGTGTTCGC GGGCTCCGCG CAGTTCATCG CACTCGGCCT GATCGCCGGC
AGCGCGAGCT TCGTCGTCGT GCTCGCGACG ACGCTGATCG TGAACCTGCG TCACCTGCTG
TACAGCGCGA CGCTCGCGCC GTACGTCGCG CACCTGCCGC TGCGCTGGCG CGCGACGCTC
GGCGCGCTGC TGACCGACGA GGTGTTCGCG GTCGCCTACT CGCACTACCG GCACTTCCCG
CCCGGTGCGA TCGGCCCCCA CTACTTCTTC GGTTCGGGCC TCGCGATGTA CCTGAACTGG
CAGGTCTGGA CGCTCGCGGG CATCGGCTTC GGCGCGGCCT TCCCGGGCCT CCAGTCGCTC
GGCCTCGATT TCGCGATGGC GGCGACCTTC ATCGCGATCG TCGTCCCGCA GCTCGGCAAG
CTGCGCTATT TCGCGGCCGC CGCGACAGCC GGCACGCTCG CCTACTTCTG GCAGGGCTGG
CCGTACAAGC TCGGGTTACT GGGCGCGGTC GCCGCCGGCG TCGCGGTCGG TGTCGCGCTC
ACGGTAAGGC ACAAGCGCTC GCGCACCGGT TCACGCACGG AGGCCGCATC GTGA
|
|---|
| Protein sequence | MEKRPLNPPS TPSPPPRSPF NEWLDGARDT IPMMIGAAPF GVIFGTLVAG GPLAAWHGAL
MSLAVFAGSA QFIALGLIAG SASFVVVLAT TLIVNLRHLL YSATLAPYVA HLPLRWRATL
GALLTDEVFA VAYSHYRHFP PGAIGPHYFF GSGLAMYLNW QVWTLAGIGF GAAFPGLQSL
GLDFAMAATF IAIVVPQLGK LRYFAAAATA GTLAYFWQGW PYKLGLLGAV AAGVAVGVAL
TVRHKRSRTG SRTEAAS
|
|---|
| |