| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0967 |
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| Symbol | |
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| ID | 4311418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 1058237 |
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| End bp | 1059625 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638148769 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_772860 |
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| Protein GI | 115351021 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.932307 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCATT CCGGTCTTAC GCGGACGGCC GCCGCGCCGC CCTCCCTGTC CAGTCACGCC
GCCGATACCG CGCGCCTCGC CGCGCCGCTC GCGATCGCAC AGCTCTCGCA GATGGCGATG
AGCGTCACCG ACACCGTGCT GCTCGGCTCG CTCGGCCCCG ATTCGCTCGC GGCGGGCGGC
CTCGGCGCGA ACTACTTCTT CGTCATCGTG ACCGTGCTGC AAGGCGTGCT GTCGTCGGTC
AGCGTGAGCG TCGCGCATGC GCGCGGCGCG CAGGCGGAGC ACCGCGTGCC GCACATCTAC
TGGACCGGCT TCGTGCTGTC GTTGCTGCTC GCGATTCCGG CGATCGTCGC GCTGTCGCTG
TCCGAACCGA TCCTGCTGAT GTTCCACGAG CCGCCGACGC TCGCGCATCA CGTCGGCGAA
TACACCGGCA TCCTGCGGTT CGCGGCGCTC GGCAGCCTGA TCGGCGTCGG GCTGATGCGC
GCCTTTCTCC CCGCGATCGG CGCCGCGCGG CGGCTGCTGT GGGTGTCGAT CGGCGGCGTC
GGCGTCAACG CCGTGCTGAA CTACGGGCTG ATCCACGGCG CATTCGGCCT ACCGCGGCTC
GGCTTCCTCG GCTCCGCGGT CGCGACGACC ATCACGATCT GGCTGACCGC GCTCGCGCTG
ATCTGGCTGC TGCACGGCCG CGAGCGGTTC CGCCATTTCG TGACGGCCGC CCGCCCGAAA
CTGCCCATGA TGGGCGAGCT GATCGGCATC GGCTGGCCGG TCGCGATCAC GTACGGGGTC
GAATCGACGC TGTTTCTGGC GACGGGCCTG ACCGTCGGCG TGCTCGGCGC GACCTCGCTC
GCCGCGCATC AGATCGCGCT GAACGTCGCA TCGCTCGCGT TCATGGTGCC GCTCGCGATC
GGGCAGGCCG CGAACGTACG GGTCGGCTAC TGGGTCGGCG CCGGCGAGCC GGTCGCCGCA
CGGCACGCGG GCTTCGTCGC GCTCGGCCTC GGCGTCGCGT TCATGTCGCT GTCGGGGCTC
GTGCTGATCG TCGCGCCGCA TGCGATCGTC GGTCTGTACC TGCACCTCGA CGACCCGGCC
AACGCGGCGA CCGTGTCGCT TGCCGCGTCG CTGCTCGGCA TCGCCGCGGT GTTCCAGATC
GTGGACGGGA TGCAGACGGT CGCGTCGGGC GCGCTGCGCG GGCTGCGGGA TACGCGCATC
CCGATGCTCG CGGCCACCCT CGGCTATTGG GGCATCGGCT TCCCGACCGG TTACTGGTTG
GCGTTCCACG CGGGCCTCGG CGCACGCGGC CTGTGGTGGG GGCTCGCGGC CGGCCTCGCC
AGCGTCGCCG TGCTGATGGC CTGTCGGTTT CACATGAAGA CCGCGTCGCT CATCGCGTCG
GCGCGCTGA
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| Protein sequence | MSHSGLTRTA AAPPSLSSHA ADTARLAAPL AIAQLSQMAM SVTDTVLLGS LGPDSLAAGG
LGANYFFVIV TVLQGVLSSV SVSVAHARGA QAEHRVPHIY WTGFVLSLLL AIPAIVALSL
SEPILLMFHE PPTLAHHVGE YTGILRFAAL GSLIGVGLMR AFLPAIGAAR RLLWVSIGGV
GVNAVLNYGL IHGAFGLPRL GFLGSAVATT ITIWLTALAL IWLLHGRERF RHFVTAARPK
LPMMGELIGI GWPVAITYGV ESTLFLATGL TVGVLGATSL AAHQIALNVA SLAFMVPLAI
GQAANVRVGY WVGAGEPVAA RHAGFVALGL GVAFMSLSGL VLIVAPHAIV GLYLHLDDPA
NAATVSLAAS LLGIAAVFQI VDGMQTVASG ALRGLRDTRI PMLAATLGYW GIGFPTGYWL
AFHAGLGARG LWWGLAAGLA SVAVLMACRF HMKTASLIAS AR
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