| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0960 |
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| Symbol | |
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| ID | 4309640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 1049696 |
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| End bp | 1051093 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638148762 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_772853 |
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| Protein GI | 115351014 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAGCCG AGCAGCGGCA TGTGATCTAT TTCTCGCGCG AGCCGAACGA CGCGTTGCGC
GGGCATTTCG ACGAATGCGG ATGGTGCGTC GATCTCGCGG AAAGCGCACG CGACTTGCGG
CGTGTCGTGC AGCACGGCGT GGCATCCGCC GGCCTGCTCG ATTTCTCGCC GGGTTTCAGG
CCCGCGGATC TGCGCGAACT CGAAGCGTGT CTGAGCATCC AGCACATCGG CTGGATCGCG
GCGACCCGGC GTGGCCAGTT GCAGGACGCC ACGTTGCGCC ATCTCATCCG TGACTATTGC
TTCGACTACG TGACGATGCC GTACGAGACG TCGCGCATCG TCGAGACCGT CGGCCACGCG
CACGGCATGA TCGCGCTGAC CGACCCGGTG GCGTCGCCGG TCGGCGCGGG GCGCACCGAA
GGCGAGATGG TCGGCACCTG CGATGCGATG CTCGGCCTTT TCAGGACGAT CCGGCGCGTC
GCGACCACCG ATGCGCCGGT GTTCATCTCC GGTGAATCGG GTACCGGCAA GGAGCTGACG
GCCGTCGCGA TTCACGAGCG CTCGGCGCGC GCGCAGGCGC CGTTCGTCGC GATCAACTGC
GGGGCGATTC CGTCGACGCT GCTGCAAGCC GAACTGTTCG GCTATGAGCG CGGCGCGTTT
ACGGGCGCGA ACCAGCGCAA GATCGGCCGC GTCGAGGCCG CGAACGGCGG CACGCTGTTT
CTCGACGAAA TCGGCGACCT GCCGCTCGAG AGCCAGGCGA GCCTCCTGCG GTTCCTGCAG
GAAGGCAAGA TCGAGCGGCT CGGCGCGCAT GTATCGGTGC CGGTCGACGT GCGCGTGATC
TGCGCGACGC ATGTGGACAT GGAAACGGCG CTGCGCGAAG GGCGCTTCCG CGAGGATCTG
TTCCATCGTC TGTGCGTGCT GAAGATCGAG GAGCCGCCGC TGCGCGCGCG CGGCAAGGAC
ATCGAGGTGC TCGCTCGCCA CATGCTCGAG CGTTTCAAGG GCGATGCGCA TCGTCGCTTG
CGTGGCTTCT CTCCGGACGC GATCGCCGCG CTGTACGGCT ATTCGTGGCC GGGCAACGTG
CGCGAGCTGA TTAATCGCGT GCGCCGCGCG ATCGTGATGT CGGAGGGCCG GATGATTACC
GCGGCCGATC TCGAGCTCCA CGAATTCGCG ATACTGGCGC CCGTCTCGCT CACCGAGGCG
CGGGAAGCGG CCGAGCGGCA GGCGATCGAG CAGGCGCTGC TGCGTCATCG CGGCCGTTTT
GCCGATGCGG CGCGTGAGCT CGGCGTGTCG CGCGTCACGC TGTACAGGCT GATGTGCGCG
CATGGCATGC GCGATCGCGG CGACACGCTG GCAGGGTTTT CGGCGCCGGC GCCGGAGGTT
CCGCGTCACG CTTGCTAA
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| Protein sequence | MGAEQRHVIY FSREPNDALR GHFDECGWCV DLAESARDLR RVVQHGVASA GLLDFSPGFR
PADLRELEAC LSIQHIGWIA ATRRGQLQDA TLRHLIRDYC FDYVTMPYET SRIVETVGHA
HGMIALTDPV ASPVGAGRTE GEMVGTCDAM LGLFRTIRRV ATTDAPVFIS GESGTGKELT
AVAIHERSAR AQAPFVAINC GAIPSTLLQA ELFGYERGAF TGANQRKIGR VEAANGGTLF
LDEIGDLPLE SQASLLRFLQ EGKIERLGAH VSVPVDVRVI CATHVDMETA LREGRFREDL
FHRLCVLKIE EPPLRARGKD IEVLARHMLE RFKGDAHRRL RGFSPDAIAA LYGYSWPGNV
RELINRVRRA IVMSEGRMIT AADLELHEFA ILAPVSLTEA REAAERQAIE QALLRHRGRF
ADAARELGVS RVTLYRLMCA HGMRDRGDTL AGFSAPAPEV PRHAC
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