Gene Bamb_0954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0954 
Symbol 
ID4309634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand+ 
Start bp1044642 
End bp1045262 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content66% 
IMG OID638148756 
Productoligoribonuclease 
Protein accessionYP_772847 
Protein GI115351008 
COG category[A] RNA processing and modification 
COG ID[COG1949] Oligoribonuclease (3'->5' exoribonuclease) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGATA CCGCCGCTTC CGCCAGCCAG CCCGCGCTCG TGCGCAACGA GTTGAACCTC 
GTCTGGCTCG ACATGGAGAT GACGGGCCTC GACCCGGATA ACGACCGCAT CATCGAAATC 
GCGGTCGTCG TGACCAATTC CACCCTCGAC ATCGCGGTGG AAGGCCCCGT GTTCGCGATC 
CACCAGAGCG ACGAAACGCT CGCGAAGATG GACGACTGGA ACAAGTCGAC GCACGGCCGT 
TCGGGGCTGA TCGATCGCGT GCGCGCGTCG ACCGTGACCG AGGCGGACGC CGCCGCGCAG 
CTGCAGGCGT TCCTCGCGCA GTACGTGTCG CCCGGCAAGT CGCCGATGTG CGGCAACTCG 
ATCTGCCAGG ATCGCCGCTT CATGGCGCGC TGGATGCCGG AATTCGAGCG GTTCTTCCAC 
TACCGCAACC TGGACGTCAG CACGCTCAAG GAGCTGTGCC GCCGCTGGCA GCCCGCGATC 
TACAAGGGTT TTCAGAAGCG CGCGATGCAC ACGGCGCTCG CGGACATCCA CGAGTCGATC 
GACGAGCTGA AGTACTACCG CCAGCATTTC CTGATTCCGG CCGCGTCGGC GCCGGCAGGC 
GAGTCCGCGC CGGCCGCCTG A
 
Protein sequence
MTDTAASASQ PALVRNELNL VWLDMEMTGL DPDNDRIIEI AVVVTNSTLD IAVEGPVFAI 
HQSDETLAKM DDWNKSTHGR SGLIDRVRAS TVTEADAAAQ LQAFLAQYVS PGKSPMCGNS 
ICQDRRFMAR WMPEFERFFH YRNLDVSTLK ELCRRWQPAI YKGFQKRAMH TALADIHESI 
DELKYYRQHF LIPAASAPAG ESAPAA