| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0946 |
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| Symbol | rimM |
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| ID | 4308684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 1038027 |
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| End bp | 1038740 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638148748 |
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| Product | 16S rRNA-processing protein RimM |
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| Protein accession | YP_772839 |
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| Protein GI | 115351000 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.501365 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTGCCGGT CGTGCCGGCT GCAAGGAGCA TTGATGTCCG GTCACGATTC CGGTAACGCA
AAGCGCGGGC GAGCGTCGTT TGGCGCATTC GTCCGCAAGC CGGTCGAGCG CGACGTTGTC
GCGAGCGCCG GTGAGGCTGC CGAGCAGGGC AGTCTCGAAG CGGTGCAAGC CTGGCCCGAC
GATGCTGTCG AGGTCGGGGC AGTGGTCGAC GCCTATGGCC TGAAAGGCTG GATCAAGGTG
GCGACGCATG CCGACGCCGG TCGCGGCGGC GATGCGCTGC TCGACGCGCG CCGCTGGTGG
CTGGAACGGG GTGGGGAGCG GTTGTCCGCC CGCATCCTGC AGTCGAAAAC GCACGGCGAC
ACAGTCGTCG CGCATGCCGC GGGTGTCAGC GACCGCGATG CCGCATTGGC TTTGCGCGGC
TTTCGCGTGT TCGTGCGCCG GGAAGATTTC CCGGCATTGG CCGCGGACGA ATTCTATTGG
GTCGACCTGA TCGGTCTCGA GGTCGTCAAC GAGCAATCGG TGGCGCTTGG GACAGTGAGC
GGGATGATCG ACAACGGCGT GCATTCGATC ATGCGCGTCG AGTATCCGGC AGTCGGCAAG
GATGGTCAGC CGACCACCGA CGAACGGCTG ATTCCGTTCG TCGGCGTATA CGTCAAGACG
GTGGATCAGG CGGCACGTCG CATCGTCGTC GACTGGGAAG CCGATTACTC ATGA
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| Protein sequence | MCRSCRLQGA LMSGHDSGNA KRGRASFGAF VRKPVERDVV ASAGEAAEQG SLEAVQAWPD
DAVEVGAVVD AYGLKGWIKV ATHADAGRGG DALLDARRWW LERGGERLSA RILQSKTHGD
TVVAHAAGVS DRDAALALRG FRVFVRREDF PALAADEFYW VDLIGLEVVN EQSVALGTVS
GMIDNGVHSI MRVEYPAVGK DGQPTTDERL IPFVGVYVKT VDQAARRIVV DWEADYS
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