| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0940 |
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| Symbol | |
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| ID | 4308678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 1032668 |
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| End bp | 1033954 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638148742 |
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| Product | D-amino acid dehydrogenase small subunit |
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| Protein accession | YP_772833 |
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| Protein GI | 115350994 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAGTCG TCGTTCTGGG CAGCGGTGTG GTGGGCGTGG CAAGCGCGTA TTACCTCGCG
CGCGCCGGTC ATGAAGTCAC GGTGATCGAC CGCGAGGCCG GCCCGGCGCT GGAGACGAGC
TTCGCGAACG CCGGCCAGAT CTCGCCCGGC TATGCGGCTC CGTGGGCCGC GCCCGGCGTG
CCGCTGAAGG CCGTCAAGTG GATGTTCGAG AAGCATGCGC CGCTCGCGAT CCGCCTCGAC
GGCACGCGTT TCCAGCTCCA GTGGATGTGG CAGATGCTGC GCAACTGCAC GGCCGACCGC
TACGCAGTCA ACAAGGGCCG CATGGTCCGC CTCGCCGAAT ATAGTCGCGA TTGCCTGCAG
GCGCTGCGAG CCGATACCGG CATCCAGTAC GAAGGGCGCA CGGGCGGCAC GCTGCAACTG
TTCCGCACGC AACAGCAACT CGACGGCGCG GCGAAGGACA TCGCGGTGCT GCAGGAAGCC
AACGTGCCGT TCGAACTGCT GTCGCCGGCC GAGTTGAAGA ACGCCGAACC GGCGCTCGCC
GCCGTGTCGC ACAAGCTGAC GGGCGGCCTG CGCCTGCCGG GCGACGAAAC GGGCGACTGC
CAGCTGTTCA CGACGCGCCT CGCGGCGCTC GCGGAATCGC TCGGCGTGAA GTTCCGCTAC
AACACGCCGA TCGATTCGCT CGCGATCGCG GGAGGGAGGA TCGCCGGTGT GCAGTGCGGC
AGCGAGACGG TGCGCGCGGA TGCGTATGTC GTCGCGCTCG GCTCGTACTC GACCAGCTTC
ATCTCGAACC TGATGAAGAT CCCGGTCTAT CCGCTGAAGG GCTATTCGAT CACCGCGCCG
ATCGTGAACG ACGCGGCGGC CCCTGTATCG ACGGTGCTCG ACGAAACCTA CAAGATCGCC
ATCACGCGTT TCGACCAGCG CATCCGTGTC GGCGGCATGG CCGAGATCGT CGGCTTCGAC
AAGAACCTGC GCGCCGCGCG CCGCGAAACG CTCGAAATGT GCGTGAACGA CCTGTTCCCG
GGCGGCGGCG ATACGTCGAA GGCAACGTTC TGGACGGGCC TGCGCCCGAT GACGCCGGAC
GGCACGCCGA TCGTCGGCCG CACGCCGGTG TCGAACCTGT TCCTGAACAC CGGCCACGGC
ACGCTCGGCT GGACGATGTC GTGCGGGTCG GGCCAGTTGC TCGCCGACCT GATCTCGGGC
AAGAAGCCGG CGATTCAGGC CGACGACCTG TCGGTGCATC GCTACCTGAA GGACGTGGCC
GGCCAGACGC GCCCGGCATA CGCATAA
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| Protein sequence | MRVVVLGSGV VGVASAYYLA RAGHEVTVID REAGPALETS FANAGQISPG YAAPWAAPGV
PLKAVKWMFE KHAPLAIRLD GTRFQLQWMW QMLRNCTADR YAVNKGRMVR LAEYSRDCLQ
ALRADTGIQY EGRTGGTLQL FRTQQQLDGA AKDIAVLQEA NVPFELLSPA ELKNAEPALA
AVSHKLTGGL RLPGDETGDC QLFTTRLAAL AESLGVKFRY NTPIDSLAIA GGRIAGVQCG
SETVRADAYV VALGSYSTSF ISNLMKIPVY PLKGYSITAP IVNDAAAPVS TVLDETYKIA
ITRFDQRIRV GGMAEIVGFD KNLRAARRET LEMCVNDLFP GGGDTSKATF WTGLRPMTPD
GTPIVGRTPV SNLFLNTGHG TLGWTMSCGS GQLLADLISG KKPAIQADDL SVHRYLKDVA
GQTRPAYA
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