| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0937 |
|---|
| Symbol | |
|---|
| ID | 4308675 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 1029610 |
|---|
| End bp | 1030404 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638148739 |
|---|
| Product | YaeC family lipoprotein |
|---|
| Protein accession | YP_772830 |
|---|
| Protein GI | 115350991 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
|---|
| TIGRFAM ID | [TIGR00363] lipoprotein, YaeC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACGAC GTTTCATGCT GAAGTTCGCG GCCGCACTCG GCGCGGCCGC GCTGTTCGTG
AGCGCACATG CGCAGGCCGA AACCATCAAG GTGGGCGTGA CGGGCGGCCC GCACGCGCAG
ATCATGGACG TGGTGAAGAA GGTCGCGGCC AAGAGCGGCC TCGACATCCG CGTCGTCGAA
TTCTCCGATT ACGTGCAGCC GAACGCGGCG CTCGCGTCGG GCGATCTGGA CGCAAACAGC
TACCAGCACG ATCCGTATCT GCAGGCGCAG GTGAAGGATC GCGGCTACAA GCTGATCAAG
GTCGCCGACA CGGTCACGTT CCCGATGGGC ATCTATTCGA AGCGCGTGAA GTCGCTGGCC
GAGCTCAAGC CCGGCGCGCG CATCGCGGTG CCGAACGACC CGACCAACGG CGGCCGCGCG
CTGCTGTTGC TGCAGAAGCA GGGGCTCCTG AAGCTGCGCG CGGACGCGGG CCTCAAGGCG
ACGCCGCTCG ACATCGTGGA CAATCCGCGC AAGCTGAAGA TCGTCGAACT CGATGCGGCG
CAGATTCCGC GCTCGCTGGC CGACGTCGAC GCGGCCGCGA TCAACACCAA CTACGCGATG
GAAGCGGGGT TGAAACCGAA GCAGGACGCG ATCGCGATCG AGGGCCCGAA CGGCCCGTAC
GCGAATGTTC TCGCGATTCG CGACGCCGAC CGGAGCAAGC CGTGGGTCGC GAAGCTGGTC
GCGGCCTACC ATTCGGCGGA AGTGAAGCAG TTCATCGAAC AGAAGTTCGG CGGGGCGGTC
ATCGCCGCCT GGTAA
|
|---|
| Protein sequence | MQRRFMLKFA AALGAAALFV SAHAQAETIK VGVTGGPHAQ IMDVVKKVAA KSGLDIRVVE
FSDYVQPNAA LASGDLDANS YQHDPYLQAQ VKDRGYKLIK VADTVTFPMG IYSKRVKSLA
ELKPGARIAV PNDPTNGGRA LLLLQKQGLL KLRADAGLKA TPLDIVDNPR KLKIVELDAA
QIPRSLADVD AAAINTNYAM EAGLKPKQDA IAIEGPNGPY ANVLAIRDAD RSKPWVAKLV
AAYHSAEVKQ FIEQKFGGAV IAAW
|
|---|
| |