| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0933 |
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| Symbol | |
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| ID | 4308671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 1025818 |
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| End bp | 1026741 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638148735 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_772826 |
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| Protein GI | 115350987 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACCG CCTTCTATAC GCACCCCGAT TGCATGTTGC ACGAGATGGG GGAATGGCAT
CCGGAATGCC CGGCCCGACT GTCGGCGATC CAGGATCAGC TGATCGCGAG CCGCATCGAC
GACCTGATCG TGCACGAAAC CGCCCCGTTC GCGAGCGAGG TGGCGCTGGG CCGCGTGCAT
ACGCAGGCTC ATATCGACTA CATCCGCAGC ATGACGCCCG TCGACGGCTA CGTCGAGATC
GATCCCGACA CGCTGATGAA CCGCGACACG TGGCGCGCCG CGCTGCGCGC GGCTGGCGCT
GCGATCGCGG CGACCGACGC GGTGATCGAA GGCCGCTACG CGAATGCGTT CTGCAGCGTG
CGGCCGCCCG GCCATCACGC GGAACCCGCG CGTGCGATGG GCTTCTGCTT CTTCAACAAC
GTGGCGATCG CCGCGCGGCA TGCGCTCGAC GTTCACGGCA TCGAGCGCGT CGCGATCATC
GATTTCGACG TGCACCACGG CAACGGCACC GAAGCCGCGT TCGCGAACGA CGAGCGCGTG
CTGATGTGCA GCTTCTTCCA GCATCCGCTG TACCCGTTCT CGGGCGCCGA TCATCAGGCG
CCGAACATGG TCAACCTGCC GATGCCGGCA CGCAGCAACG GGATGGCGAT CCGCGAAGCG
GTCGACATGT TCTGGTTGCC GCGTCTCGAC GCGTTCAAGC CGCAGATGCT GTTCGTGTCG
GCCGGTTTCG ATGCGCATCG CGAGGACGAC ATCGGCAACC TCGGCCTCGT CGAGGCTGAT
TTCGAATGGC TGACCGCGCA GGTCGTCGAC GTCGCGCGCC GGCATGCGCA GGGCCGCATC
GTGAGCTGTC TCGAGGGCGG CTACAACCTG TCCGCGCTCG GCCGCAGCGT CGTCGCGCAC
CTGCGCGTGC TGGCCGGCAT TTGA
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| Protein sequence | MATAFYTHPD CMLHEMGEWH PECPARLSAI QDQLIASRID DLIVHETAPF ASEVALGRVH
TQAHIDYIRS MTPVDGYVEI DPDTLMNRDT WRAALRAAGA AIAATDAVIE GRYANAFCSV
RPPGHHAEPA RAMGFCFFNN VAIAARHALD VHGIERVAII DFDVHHGNGT EAAFANDERV
LMCSFFQHPL YPFSGADHQA PNMVNLPMPA RSNGMAIREA VDMFWLPRLD AFKPQMLFVS
AGFDAHREDD IGNLGLVEAD FEWLTAQVVD VARRHAQGRI VSCLEGGYNL SALGRSVVAH
LRVLAGI
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