Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_0926 |
Symbol | |
ID | 4310393 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 1018176 |
End bp | 1019348 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638148728 |
Product | tetratricopeptide repeat protein |
Protein accession | YP_772819 |
Protein GI | 115350980 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.168968 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCTGG ATTTCTGGTG GTTGCTCGCA ATTCCGGTGG CGTTCGCGCT TGGCTGGGCG GCGTCACGCT ATGACCTGAA GAACCTCCTG TCGGAGAGCG CCAACCTGCC GCGATCGTAT TTCCGCGGCC TGAACTTTCT GTTGAACGAA CAACCGGACA AGGCGATCGA CGCGTTCATC GAGGTCGCGA AGCTCGACCC GGAGACGGTC GAACTGCACT TCGCGCTCGG CAACCTGTTT CGCCGCCGCG GTGAAACGGA CCGGGCGATC CGCGTGCACC AGAATCTGCT GAGTCGCACG GACCTGCCGG TGAACGAGCG CGACCACGCG CTGTATGAAC TCGGCCAGGA TTTTCTGAAA GCCGGCCTGC TCGATCGTGC CGAAGAGGCT TTCCACCGGC TCGCCGACGG CGACTACGCG CTGGGTGCGC AGCGGGCGCT GCTGACGATC TACGAGATCG AGAAGGACTG GAACAAGTCG ATCGATACCG CGAAGCGGAT CGAGTCGATG AGCGACAAGC CGCTCGCCAT CGAAATCGCG CAGTTCCACT GCGAACTCGC GCAGGACGCG CTGCAGCGCA AGAACGCCGC GGCAGCGGCC GAACAGCTGA AGCTCGCGCT TGCCGCGAAC CCGCAGAACG TGCGCGCGAC GATATTGTCG GGCGACGCCG CGGCGGCGGC GGCCGATCAC GCGGACGCGA TCGAGCACTG GAAGCGCGTC GAAGCGCAGA ATCCGGCTTA TCTGCCGCTC GTCGCCGACA AGCTGATGAA GGCCTATGTC GCGCTCGGCA AGCCGGTCGA GGGTGCCGAG CTGCTGATGG GTTATGTCGA GCGTTATCCG TCGAACGACC TGCTCGAAAT CGCGTATCAG CACATCGCCG GGTTGCGCGG CCAGGAGGCC GCGCATACGC TCGCACGCAC GCAGATGGAG AAGTCGCCCA ACCTGTCCGG CATGCTGCAC CTGCTCGACG CGCAGATCGC GGCCGCCGAC GAGCCGCGCC GTAAGGAACT TGAAATGATG CGCGCGCTGA TCAAGCAGCG CACCAAAAAT CTGCCACGCT ATACGTGCCA GAATTGCGGT TTCCGGGCAC GGCTTTTCTA CTGGCAGTGC CCCGGATGCA GCGGCTGGGA AACCTATGCG CCGCGCCGCG TCGAACCTGC GATGCCGGGC TGA
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Protein sequence | MDLDFWWLLA IPVAFALGWA ASRYDLKNLL SESANLPRSY FRGLNFLLNE QPDKAIDAFI EVAKLDPETV ELHFALGNLF RRRGETDRAI RVHQNLLSRT DLPVNERDHA LYELGQDFLK AGLLDRAEEA FHRLADGDYA LGAQRALLTI YEIEKDWNKS IDTAKRIESM SDKPLAIEIA QFHCELAQDA LQRKNAAAAA EQLKLALAAN PQNVRATILS GDAAAAAADH ADAIEHWKRV EAQNPAYLPL VADKLMKAYV ALGKPVEGAE LLMGYVERYP SNDLLEIAYQ HIAGLRGQEA AHTLARTQME KSPNLSGMLH LLDAQIAAAD EPRRKELEMM RALIKQRTKN LPRYTCQNCG FRARLFYWQC PGCSGWETYA PRRVEPAMPG
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