| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0920 |
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| Symbol | |
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| ID | 4310387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 1012410 |
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| End bp | 1013399 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638148722 |
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| Product | prephenate dehydrogenase |
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| Protein accession | YP_772813 |
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| Protein GI | 115350974 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0287] Prephenate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0948545 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCCGGGA TCTGGACTTC CGTGCGCGGG GCGTCGTTCC GCGCGCGTCA CTTGGCTCTT
GTCGTGTCAG GCTTTGCATT CAACAAACTG GTCATTTTCG GCGTCGGCCT GATCGGCGGA
TCGCTGGCGC GCGCACTGCG CGAGCGCGCG CCGGGCGGCG CGGGTGAAGT CATCGGCGTC
GGCCGTTCGC GTGTATCGGT CGAGCGCGCG CTGGCACTCG GCGTGATCGA CCGCGCGGCG
GCGCTCGACG ACGACGCGCA ACTGCGCGAC GCACTGGCCG GCGCCGATCT CGTGCTGCTG
GCCGCCCCGG TCGCGCAAAC GGGTCCGCTG CTCGCGCGCA TCGCGCCGTG GCTCGACGCC
GCGACGATCG TCACCGACGC GGGCAGCACG AAGTCCGATG TCGTCGCGGC CGCGCGCGCA
GCGCTCGGTG CGCGGATCGC GCAGTTCGTG CCGGGGCATC CGATCGCCGG GCGCGAGTCG
AGCGGCGTCG AAGCCGCGCT GCCCGATCTG TACGTCGGCC GCAACGTCGT GCTGTGCCCG
CTGCCGGAGA ACGCGCCCGC CTCGGTTGCG CGGATCGACG CGATGTGGCG GGCGACCGGC
GCCGACGTGC GCACGATGAG TACCGAGCAG CACGATCGCG TGTTCGCGTC GATCAGTCAT
CTGCCGCACG TGCTGTCGTT CGCGCTCGTC GAGCAGATTC TCGGCGAGGC GGATGCCGAA
CTGAAATTCT CGTATGCGGC GGGCGGCTTT CGCGATTTCA CGCGGATCGC GGCGTCGAGC
CCGGAAATGT GGCGCGACGT GTGCGTCGCG AATCGCGCGG CGCTGCTCGA CGAGCTCGAC
GGCTACACGC GCGTGCTCGC ACGGCTGCGT GCGGCGATCG ACGCCGGCGA CGGCGCGGCG
CTCGAAGCCG TGTTCACGCG CTCGCGCGCC GCACGCAAGG CATGGCAGGA GCGCGGCGCG
CCGCCCGCTG CCGAACCGGT CAAGAAATAA
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| Protein sequence | MPGIWTSVRG ASFRARHLAL VVSGFAFNKL VIFGVGLIGG SLARALRERA PGGAGEVIGV
GRSRVSVERA LALGVIDRAA ALDDDAQLRD ALAGADLVLL AAPVAQTGPL LARIAPWLDA
ATIVTDAGST KSDVVAAARA ALGARIAQFV PGHPIAGRES SGVEAALPDL YVGRNVVLCP
LPENAPASVA RIDAMWRATG ADVRTMSTEQ HDRVFASISH LPHVLSFALV EQILGEADAE
LKFSYAAGGF RDFTRIAASS PEMWRDVCVA NRAALLDELD GYTRVLARLR AAIDAGDGAA
LEAVFTRSRA ARKAWQERGA PPAAEPVKK
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